Bioconductor GSEABenchmarkeR

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gsea GSEABenchmarkeR

updated 5 hours ago by James W. MacDonald 68k • written 9 hours ago by Adithi • 0

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GSEABenchmarkeR pairedGSEA GeneSetEnrichment

written 12 months ago by info ▴ 10

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GSEABenchmarkeR

13 months ago info ▴ 10

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lfcshrink GSEABenchmarkeR DESeq2

updated 2.2 years ago by ATpoint ★ 5.0k • written 2.2 years ago by delphine.rossille • 0

4 results • Page 1 of 1

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Answer: GSEA error by James W. MacDonald 68k

At a very high level, the way non-model organisms are annotated is by using blast to find orthologs in other species that are well annotate…

Comment: Unable to find ENTREZ IDs by Adithi • 0

Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…

Comment: Unable to find ENTREZ IDs by Adithi • 0

Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…

Answer: Unable to find ENTREZ IDs by James W. MacDonald 68k

Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…

Answer: Inconsistencies between accessor functions for TxDb databases with selected seql by a2a2hd42aa • 0

Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…

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Answer: OrgDb for maize

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?

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