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GUIDEseq
•
reset
3
votes
1
reply
648
views
Major on-target peak not appearing in GUIDEseq results
GUIDEseq
updated 3.2 years ago by
Julie Zhu
★ 4.3k • written 3.2 years ago by
David Kuo
• 0
2
votes
4
replies
1.5k
views
GUIDESeq analysis - handling biological and technical replicates
guideseq
updated 6.7 years ago by
Julie Zhu
★ 4.3k • written 6.7 years ago by
aamir.mir
• 0
2
votes
1
reply
1.2k
views
createBarcodeFasta in GUIDEseq
GUIDEseq
updated 6.7 years ago by
Julie Zhu
★ 4.3k • written 6.7 years ago by
aamir.mir
• 0
1
vote
3
replies
825
views
GUIDEseq BED input error
GUIDEseq
4.4 years ago
tomas.rodriguez
▴ 10
0
votes
1
reply
676
views
GUIDEseq outputDir error
GUIDEseq
updated 4.7 years ago by
Julie Zhu
★ 4.3k • written 4.7 years ago by
tomas.rodriguez
▴ 10
0
votes
2
replies
876
views
GUIDEseq Error in GAlignmentPairs
GAlignmentPairs
GUIDEseq
updated 4.7 years ago by
Julie Zhu
★ 4.3k • written 4.7 years ago by
tomas.rodriguez
▴ 10
0
votes
4
replies
969
views
GUIDEseq Error using offTargetAnalysisOfPeakRegions
GUIDEseq
updated 4.4 years ago by
Julie Zhu
★ 4.3k • written 4.4 years ago by
tomas.rodriguez
▴ 10
0
votes
2
replies
853
views
getUniqueCleavageEvents() not working in GUIDEseq package
GUIDEseq
updated 3.2 years ago by
Julie Zhu
★ 4.3k • written 3.3 years ago by
Tiffany
• 0
0
votes
0
replies
400
views
GUIDEseq: read count for each offtarget
GUIDEseq
24 months ago
sharvari gujja
▴ 40
0
votes
1
reply
539
views
GUIDEseq - Error combining individual steps into the pipeline
GUIDEseq
updated 24 months ago by
Julie Zhu
★ 4.3k • written 24 months ago by
sharvari gujja
▴ 40
0
votes
0
replies
343
views
GUIDEseq - filtering offtarget sites present in background controls
GUIDEseq
24 months ago
sharvari gujja
▴ 40
0
votes
0
replies
468
views
Question about input to binReads.sh in GUIDEseq
GUIDEseq
24 months ago
sharvari gujja
▴ 40
0
votes
6
replies
1.0k
views
Option to override removal of duplicate reads - GUIDEseq
GUIDEseq
updated 21 months ago by
Julie Zhu
★ 4.3k • written 21 months ago by
sharvari gujja
▴ 40
0
votes
0
replies
978
views
Analyzing CIRCLE-seq data using GUIDEseq package
GUIDEseq
CIRCLE-seq
6.5 years ago
Julie Zhu
★ 4.3k
0
votes
1
reply
639
views
GUIDEseq bam input
GUIDEseq
bam
updated 4.7 years ago by
Julie Zhu
★ 4.3k • written 4.7 years ago by
tomas.rodriguez
▴ 10
0
votes
3
replies
951
views
GUIDEseq plus/minus strand inputs
GUIDEseq
updated 4.7 years ago by
Julie Zhu
★ 4.3k • written 4.7 years ago by
tomas.rodriguez
▴ 10
16 results • Page
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Hi Michael, I think there is something wrong with the generation of nullranges. I was working with small RNA and methylation overlaps. …
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This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
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