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GeneMeta
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H bond prediction of two sequences
GeneMeta
generegulation
2.4 years ago
Marcus
• 0
5
votes
4
replies
2.0k
views
meta analysis of microarrays of small sample sizes
preprocessing
microarray
genemeta
updated 8.4 years ago by
alexvpickering
▴ 110 • written 8.4 years ago by
Lian Liu
▴ 20
0
votes
2
replies
1.8k
views
Missing values - metaArray, GeneMeta, RankProd, metahdep
RankProd
GeneMeta
metaArray
RankProd
GeneMeta
metaArray
13.6 years ago
boczniak767
▴ 740
0
votes
0
replies
1.1k
views
Obtaining unadjusted permutation p-value from GeneMeta package
GeneMeta
GeneMeta
14.3 years ago
Seungwoo Hwang
▴ 80
0
votes
0
replies
1.2k
views
GeneMeta for 2 color microarray
Microarray
limma
GeneMeta
Microarray
limma
GeneMeta
14.9 years ago
Paul Leo
▴ 970
0
votes
6
replies
1.7k
views
Combining two datasets - help to use GeneMeta.
rae230a
affy
GeneMeta
rae230a
affy
GeneMeta
updated 18.7 years ago by
Darlene Goldstein
▴ 230 • written 18.7 years ago by
Sharon Anbu
▴ 480
0
votes
0
replies
933
views
question about the GeneMeta package
GeneMeta
GeneMeta
19.7 years ago
ivan.borozan@utoronto.ca
▴ 80
7 results • Page
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Comment: orgDB
by
shepherl
4.1k
You should look at the documentation on the help pages for those packages. It should be clear enough there. But to speed things along: `…
Comment: DiffBind edgeR normalization --- why are the normalization factors all equal to
by
Harry
• 0
It's interesting to see how the normalization factors are all 1, yet the MA plot reflects changes, indicating that the normalization proces…
Comment: European Bioconductor Conference 2023 planning
by
Andrew
• 0
Great information! This is a great opportunity for the computational biology community to connect and grow. @[Chill Guy Clicker][1] [1…
Comment: orgDB
by
Fatima
• 0
how to do that?
Answer: Is it possible to model DNA methylation as a dose response in edgeR?
by
Gordon Smyth
52k
edgeR works with any linear model, so handles any combination of factors and covariates. If you include dose as a covariate in the linear m…
Votes
A: What is the "linear model" part used for in Limma?
Comment: Use of limma R package with targeted proteomics for DE analysis
A: Unbalanced experiment with multiple samples from each patient.
Unbalanced experiment with multiple samples from each patient.
Answer: Vertical line at A=0, nothing else, on MA plot
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