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ChIPpeakAnno findOverlapsOfPeaks error: "Error in FUN(X[[i]], ...) : Inputs contains duplicated ranges. please recheck your inputs."
HELP ChIPpeakAnno
6 months ago lexi.kellington • 0
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STRINGdb string_db$map error
STRINGdb HELP
updated 12 weeks ago by ▴ 70 • written 12 weeks ago by • 0
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Answer: Feature request: syntax for dropping unused seqlevels in GRanges objects by story.benjamin ▴ 10
## Drop all unused seqlevels: seqlevels(gr) <- seqlevelsInUse(gr)
Comment: CPM after RUVseq by Jess • 0
Thank you, it was!
Answer: unable to install RBGL by James W. MacDonald 59k
That might have been transitory. If you try again, does it work, or is it consistent?
Comment: error with: .make_splicings <- function(exons, cds, stop_codons=NULL) by James W. MacDonald 59k
It's not clear from this what the problem is. Rather than running under `snakemake` you might run the R code directly. I mean it's obvious …
Comment: CPM after RUVseq by James W. MacDonald 59k
I am unfamiliar with a `counts` function (your `counts(set)`), so it's not clear what exactly you are putting into that `DGEList`. But if i…
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Comment: CPM after RUVseq
A: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
Answer: CPM after RUVseq
Comment: Merging two plated in R
Answer: Merging two plated in R
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