Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
HPC
•
reset
0
votes
0
replies
697
views
Job:
Postdoc+PhD position: AI large-language models of single-cell data for cancer immunogenomics
JobPosting
AI
HPC
CuratedAtlasQueryR
14 months ago
Stefano Mangiola
▴ 40
5
votes
25
replies
2.8k
views
limma models out of memory issue on Slurm HPC
Regression
limma
STATISITICS
HPC
updated 17 months ago by
Gordon Smyth
52k • written 17 months ago by
Jitendra
▴ 10
0
votes
0
replies
772
views
Fatal error: Wrong thread calling 'RunFinalizers'
featureCount
Rsubread
HPC
23 months ago
kthapa
• 0
4
votes
8
replies
4.0k
views
R package installation error
HPC
R
Bioconducter
3.5 years ago • updated 3.4 years ago
Jitendra
▴ 10
0
votes
0
replies
759
views
Profiling bioconductor packages in a straightforward fashion
HPC
profiling
performance
3.9 years ago
Jack
• 0
2
votes
2
replies
1.8k
views
Problem installing Minfi on Cluster
Minfi
local installation
Centos
hpc
updated 7.4 years ago by
Kasper Daniel Hansen
★ 6.5k • written 7.4 years ago by
Goku
• 0
6 results • Page
1 of 1
Recent ...
Replies
Answer: ROAST compare results with complex design
by
James W. MacDonald
68k
You are specifying that the last column of your design should be used as the contrast. You should instead use `contrast[,1]`, which will us…
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
James W. MacDonald
68k
Yes. You can infer that by figuring out what each coefficient measures. Here is your design matrix: ``` > targets ID Name phase G…
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
snijesh
▴ 200
I would like to clarify whether the command `res <- results(dds, name = "phaseLP.conditionTreated")` is the correct approach to generate …
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
James W. MacDonald
68k
Not sure I understand. You ask how to do something and then show how one would do so.
Comment: DiffBind getting Fold values of near 0
by
littlefishes20
▴ 10
Same issues. All peaks return to a fold near 0, although they are significant when visualizing in IGV. Please find the MAplot and volcanoPl…
Votes
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
Can NanoString data be analyzed using DESeq2?
Awards
• All
Popular Question
to
Gordon Smyth
52k
Popular Question
to
boczniak767
▴ 740
Popular Question
to
Young Tae
• 0
Popular Question
to
Robert Castelo
★ 3.4k
Popular Question
to
littlefishes20
▴ 10
Locations
• All
The city by the bay,
2 minutes ago
Netherlands,
13 minutes ago
Chile,
20 minutes ago
United States,
24 minutes ago
Seattle, WA, United States,
1 hour ago
Traffic: 700 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6