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featureCount
•
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0
votes
0
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143
views
Fatal error: Wrong thread calling 'RunFinalizers'
featureCount
Rsubread
HPC
10 weeks ago
kthapa
• 0
0
votes
2
replies
697
views
output file conversion from FeatureCount to DESeq2 - no duplicate for samples
DESeq2
FeatureCount
updated 15 months ago by
ATpoint
★ 3.6k • written 15 months ago by
Jiayi
• 0
0
votes
1
reply
564
views
quantifying exom reads featureCount
ExomeSeq
featureCount
2.0 years ago
adR
▴ 30
4
votes
4
replies
1.3k
views
Issues loading a BAM file resulted from featurecounts
featurecount
rsubread
GenomicAlignments
3.7 years ago
Konstantinos Yeles
▴ 80
2
votes
6
replies
2.2k
views
featureCount error - cannot identify gene_id
dexseq
rsubread
featureCount
software error
updated 4.0 years ago by
Yang Liao
▴ 380 • written 4.0 years ago by
seung.ho.steven.choi
• 0
2
votes
1
reply
1.5k
views
How to change stringtie gene_id names with ref_gene_id when performing featureCount
featureCount
rna-seq
gene_id
re_gene_id
stringtie
updated 4.9 years ago by
Wei Shi
★ 3.5k • written 4.9 years ago by
IRAIA.MAIALEN
• 0
6 results • Page
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Comment: DiffBind getting Fold values of near 0
by
ATpoint
★ 3.6k
Almost certainly data are noisy and DESeq2 (which is used internally) shrinks the fold changes towards zero, because the naive fold changes…
Comment: metagenomeSeq 1.16.0: unique features give NA's for logFC / p-val?
by
liqiong464
• 0
Hey, I encountered similiar problems now as handibles metentioned. But it seems a bit different somehow. I have 51 samples divided…
Comment: bam or VCF files from GSE75010
by
3
• 0
Because it is so clever and unique, I believe that many more ideas will be inspired by and borrowed from your original concept. [five night…
Comment: How does Deseq2 deal with the row with zero when calculating size factors
by
3
• 0
Thank you for sharing. I've read a great deal on relevant topics! Unlike other articles, yours really made an impression on me. I hope you'…
Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label
by
3
• 0
Wonderful blog. It was wonderful to read your writings. This was a pretty fun read for me. I've bookmarked it and can't wait to read more f…
Votes
Comment: Ensembl down???
Comment: Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and
Comment: Ensembl down???
Answer: SingleR annotation of several slots/patients
Answer: List of Deprecated Packages for Bioc3.18
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