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fastMNN reconstructed matrix
fastMNN
Interpretation
4.4 years ago
mloza
▴ 10
0
votes
1
reply
2.2k
views
Low basemean and extremely high log2FC values, DESeq2
deseq2
interpretation
updated 5.7 years ago by
Michael Love
42k • written 5.7 years ago by
g.wang2
• 0
0
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1
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1.9k
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Pathview results interpretation
pathview
interpretation
6.4 years ago
Aurora
▴ 20
2
votes
11
replies
2.8k
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RNA degradation plot interpretation
xps
rnadegradationplot
interpretation
updated 8.6 years ago by
cstrato
★ 3.9k • written 8.7 years ago by
Biologist
▴ 120
4 results • Page
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Answer: DESeq Input from Salmon + tximport/tximeta
by
Michael Love
42k
Given nf-core's pipeline here, you can use rounded counts from `gene_counts_length_scaled.tsv`.
Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim
by
josephjohnsonlo
• 0
[Fight Club Red Leather Coat][1] [1]: https://www.leather-outwears.com/product/fight-club-tyler-durden-red-leather-jacket
Comment: Question about using LRT test for time course experiments with DESeq2
by
James W. MacDonald
67k
You don't want to add a logFC on top like that, as it invalidates the p-value. Maybe I wasn't clear before. The LRT gives you all the gene…
Comment: Question about using LRT test for time course experiments with DESeq2
by
Denise
• 0
Hi James, Thank you very much for your very detailed explanation! I guess my question is simpler than that, I just want to union, across…
Answer: featureCounts segmentation fault with large chromosomes
by
vkkodali
▴ 10
Thanks to @yangliao this issue is fixed in subread v2.0.8
Votes
Answer: featureCounts segmentation fault with large chromosomes
Answer: Supercells with Basilisk fails for dtype('float64') to dtype('int64') conversion
Comment: Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chu
Comment: Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chu
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
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