Bioconductor MoleculeExperiment

Showing : MoleculeExperiment • reset

0

votes

0

replies

572

views

JobPosting CuratedAtlasQueryR MoleculeExperiment SingleCellExperiment SpatialExperiment

7 months ago Stefano Mangiola ▴ 20

0

votes

0

replies

365

views

tidySpatialExperiment SpatialExperiment MoleculeExperiment

9 months ago info ▴ 10

0

votes

3

replies

776

views

MoleculeExperiment DifferentialExpression DESeq2

updated 13 months ago by ATpoint ★ 4.6k • written 13 months ago by michelafrancesconi8 • 0

0

votes

1

reply

511

views

MoleculeExperiment

updated 17 months ago by ATpoint ★ 4.6k • written 17 months ago by irenekokosaikia • 0

4 results • Page 1 of 1

Recent ...

Replies

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 67k

If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…

Answer: Meffil: error in functional normalization function (Error in rg.to.mu(rg, probes by a.alkema • 0

Oh, that's silly - thanks, will do!

Answer: Meffil: error in functional normalization function (Error in rg.to.mu(rg, probes by James W. MacDonald 67k

This support site is meant to provide support for Bioconductor packages, but `Meffil` is not part of Bioconductor. You could presumably con…

Comment: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

> It looks like the ssgseaParam function might not be passing the > correct parameters to GSVA::gsva() Apparently because of the extra com…

Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu by franknappi14 • 0

I tried it and it's working properly.

Votes

Comment: Unused arguments error without used arguments in GSVA?

Answer: Reducing and aggregating GRanges with gaps using plyranges

Answer: Find exact GRanges match keeping metadata columns

Answer: Unused arguments error without used arguments in GSVA?

Awards • All

Scholar to Michael Love 43k

Popular Question to Malcolm Cook ★ 1.6k