Bioconductor PLGEM

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PLGEM

10.7 years ago pstopka • 0

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miRNA Metabolomics Proteomics Normalization plgem miRNA Metabolomics Proteomics plgem

13.4 years ago Norman Pavelka ▴ 140

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plgem plgem

updated 13.7 years ago by Olli Kannaste ▴ 20 • written 13.7 years ago by Norman Pavelka ▴ 140

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Biobase plgem Biobase plgem

14.4 years ago Norman Pavelka ▴ 140

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Biobase plgem Biobase plgem

14.4 years ago Norman Pavelka ▴ 140

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limma plgem limma plgem

14.4 years ago Norman Pavelka ▴ 140

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limma plgem limma plgem

14.4 years ago Norman Pavelka ▴ 140

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limma plgem limma plgem

14.4 years ago Amin Moghaddasi ▴ 130

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Microarray Proteomics limma plgem Microarray Proteomics limma plgem

updated 15.3 years ago by Yolande Tra ▴ 120 • written 15.3 years ago by Pavelka, Norman ▴ 70

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plgem cycle plgem cycle

15.4 years ago Pavelka, Norman ▴ 70

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plgem plgem

15.5 years ago Pavelka, Norman ▴ 70

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Comment: Deseq2 DE analysis of host-pathogen samples (model separately or jointly?) by a2a2ddrhaa • 0

For those taking a break from the lab, the CT777 Game download https://ct7777.pk/ offers a high-performance entry into online mobile gaming…

Answer: Subsetting data verses contrasts [DESeq2]? by ATpoint ★ 5.0k

This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you so much for your help! will try to proceed with the suggestion

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…

Answer: Bulk RNAseq analysis for by Gordon Smyth 53k

All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…

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Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

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Popular Question to James W. MacDonald 68k