Bioconductor ROntoTools

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KEGGREST ROntoTools KEGG KEGGgraph

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ROntoTools Rstudio bioconductor administratorIssues pathway analysis

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Pathways ROntoTools Pathways ROntoTools

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Microarray Category gage KEGGREST ROntoTools Microarray Category gage KEGGREST ROntoTools

updated 12.1 years ago by Paul Shannon ▴ 470 • written 12.1 years ago by enricoferrero ▴ 680

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Comment: Issue with Soft-Thresholding in WGCNA by jun • 0

[Snow Rider 3D][1] offers a unique blend of excitement and strategy! Master your snowboarding techniques, explore breathtaking landscapes, …

Answer: Issue with Soft-Thresholding in WGCNA by misty.chickadee.vckc • 0

Hi Maria, your detailed explanation is super helpful! The NA power estimate in WGCNA can be tricky. I've sometimes seen that when the data …

Comment: Interpretation of output of AffyRNAdeg and hist commands by debasainalsa • 0

When working with AffyRNAdeg output it helps to think of the table like browsing a HEYTEA Menu each row shows a feature of your slides and …

Comment: DESeq2 for candidate gene analysis by piffelpaff ▴ 20

thank you so much for answering Dr. Love!

Answer: DESeq2 for candidate gene analysis by Michael Love 43k

Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…

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A: Multi-level experiments in Limma

Answer: Should voomWithQualityWeights still be used when the sample-specific weights var

Answer: DESeq2 for candidate gene analysis

DESeq2 for candidate gene analysis

Answer: DESeq2 for candidate gene analysis

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