Showing : ROntoTools • reset
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ROntoTools: Set returned by keggPathwayGraphs is missing 121 pathways reported by keggPathwayNames
KEGGREST ROntoTools KEGG KEGGgraph
3.3 years ago abf ▴ 30
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Error with R package RontoTools regarding administrator issues downloading updated KEGG data
ROntoTools Rstudio bioconductor administratorIssues pathway analysis
10.2 years ago svlachavas ▴ 840
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Error in keggPathwayGraphs when updateCache = TRUE
Pathways ROntoTools Pathways ROntoTools
11.3 years ago Guest User ★ 13k
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5.5k
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Simple pathway enrichment analysis for gene lists
Microarray Category gage KEGGREST ROntoTools Microarray Category gage KEGGREST ROntoTools
updated 12.2 years ago by ▴ 470 • written 12.2 years ago by ▴ 680
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Answer: Must I do pseudobulk analysis on Cell Surface Protein Labeling data of Single C by Kevin Blighe ★ 4.0k
Hello Lei, The concept of pseudobulk analysis applies equally to cell surface protein data as it does to gene expression data in single-…
Answer: Corrupted SQLite while trying to install PANTHER.db? by Kevin Blighe ★ 4.0k
My sincere apologies that my colleagues had ignored your question. The error message indicates that the SQLite database within the PANTH…
Answer: Corrupted SQLite while trying to install PANTHER.db? by Kevin Blighe ★ 4.0k
My sincere apologies that my colleagues had ignored your question. Hello Alan. The error message "database disk image is malformed" i…
Answer: mzR-Rcpp compiler version issue by Kevin Blighe ★ 4.0k
My sincere apologies that my colleagues had ignored your question. The error you encountered arises because the installed binary version…
Answer: org.Ss.eg.db MAMDC4 maps to incorrect UNIPROT key by Kevin Blighe ★ 4.0k
My sincere apologies that my colleagues had ignored your question. The duplication you observe in org.Ss.eg.db for UNIPROT accession P59…
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Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Comment: Error installing Seqinfo
Answer: replace cat with message in glmTreat when lfc = 0
Answer: replace cat with message in glmTreat when lfc = 0
Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
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