Bioconductor Silhouette Plot

Showing : Silhouette Plot • reset

2

votes

4

replies

3.5k

views

scRNA-Seq RNA-Seq Clustering Silhouette Plot

updated 7.0 years ago by Aaron Lun ★ 29k • written 7.0 years ago by hamza_karakurt ▴ 60

1 result • Page 1 of 1

Recent ...

Replies

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by chp265 • 0

Good point, I hadn't considered the fact quantitative `time` implies a (logit-)linear response *to* time. You're correct that I haven't exp…

Comment: Bile acid analysis with limpa by ATpoint ★ 5.0k

Wilcox/Mann-Whitney-U cannot work because it is bound to sample size even when all of group X are lower than all of group Y. At 4 vs 3 the …

Comment: chemmineOB install help by Jeremy • 0

I could install ChemmineOB on my MacBook Pro M1 Max using this procedure **1. Install open-babel and eigen using homebrew and create a cus…

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Gordon Smyth 53k

The design matrix that I described above is completely general. I imagine that it would be possible to use the same approach to generate fu…

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by chp265 • 0

Cool, glad to hear I wasn't missing some functionality in DESeq2. I don't know that much about the differences between DESeq2 vs edgeR; my …

Votes

Comment: limpa analysis advice

Answer: When to use edgeR or limma

Awards • All

Popular Question to julia_mcdonough • 0