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TissueEnrich
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Example from TissueEnrich documentation throws error
TissueEnrich
2.6 years ago
sarvesh.nikumbh
▴ 10
0
votes
4
replies
1.0k
views
Gene classification in TissueEnrich
TissueEnrich
updated 3.7 years ago by
Ashish Jain
▴ 10 • written 3.7 years ago by
xiaoxiaoxiaobu
• 0
0
votes
2
replies
715
views
can TissueEnrich be used to calculate the tissue-specific lncRNAs in plants?
TissueEnrich
updated 5.0 years ago by
Ashish Jain
▴ 10 • written 5.0 years ago by
Carina Yang
• 0
0
votes
1
reply
810
views
Overall genes number in the TissueEnrich package output
TissueEnrich
updated 5.3 years ago by
Ashish Jain
▴ 10 • written 5.3 years ago by
fshodan
• 0
0
votes
3
replies
1.5k
views
How to handle replicates and treatment conditions in TissueEnrich package
rna-seq
TissueEnrich
tissue-specific expression
differential expression
updated 5.3 years ago by
Ashish Jain
▴ 10 • written 5.3 years ago by
andrew.oler
• 0
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Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
robersy
• 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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