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affy package
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Different versions of r/affy combination may lead to differences in rma normalization results
microarray
affy
rma normalization
affy package
5.6 years ago
yshuang
• 0
0
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4
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5.0k
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error in sort.int , 'x' must be atomic in affy::boxplot
affy package
boxplot
hgu133plus2
oligo package
updated 8.0 years ago by
James W. MacDonald
68k • written 8.0 years ago by
Javier Pérez Florido
▴ 840
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Comment: Guidance Needed: Best Practices for Handling Technical Replicates in RNA-seq Ana
by
ATpoint
★ 4.7k
Why was my comment removed? It's irritating that it was moderated away without leaving any note.
Answer: Guidance Needed: Best Practices for Handling Technical Replicates in RNA-seq Ana
by
James W. MacDonald
68k
Please don't cross-post. You have already asked this on biostars.org, which is the correct venue for general questions like this.
Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene
by
Wolfgang RAFFELSBERGER
▴ 140
Yes, rtools4.4 is installed (and works for making my own packages)
Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene
by
Wolfgang RAFFELSBERGER
▴ 140
Thank you, this solved the problem !
Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene
by
ATpoint
★ 4.7k
I cannot reproduce this on Windows 11. Is rtools installed to allow compilation from source on Windows?
Votes
Comment: Identifying potentially associated gene set to drug response using GSVA
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Comment: Can't post a question?
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
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