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altcdfenvs
•
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0
votes
4
replies
1.3k
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probe --> probe set mapping in CDF library files
cdf
probe
altcdfenvs
cdf
probe
altcdfenvs
18.0 years ago
michael driscoll
▴ 30
0
votes
1
reply
1.0k
views
Small bug in function 'countskip.FASTA.entries' from package 'altcdfenvs'
probe
affy
makecdfenv
matchprobes
altcdfenvs
probe
affy
makecdfenv
matchprobes
altcdfenvs
updated 18.5 years ago by
lgautier@altern.org
▴ 950 • written 18.5 years ago by
Norman Pavelka
▴ 190
0
votes
1
reply
972
views
Mapping CDF from different array platforms
cdf
affy
altcdfenvs
cdf
affy
altcdfenvs
updated 18.8 years ago by
Sean Davis
21k • written 18.8 years ago by
Rifat Hamoudi
▴ 30
2
votes
3
replies
1.2k
views
How to create vectors (makeVectorsAffyBatch) , using own cdf
affymetrix microarrays
frmatools
altcdfenvs
updated 6.2 years ago by
Matthew McCall
▴ 830 • written 6.2 years ago by
osieman52
• 0
0
votes
1
reply
932
views
Creating a CDFenv without cdf file
altcdfenvs
altcdfenvs
updated 18.5 years ago by
lgautier@altern.org
▴ 950 • written 18.5 years ago by
Nicholas Lewin-Koh
▴ 430
0
votes
1
reply
965
views
error msg for probe match (altcdfenvs)
probe
altcdfenvs
probe
altcdfenvs
updated 13.5 years ago by
Laurent Gautier
★ 2.3k • written 13.5 years ago by
Jack Luo
▴ 440
0
votes
1
reply
860
views
altcdfenvs: mapping probes and creating new probe sets: guidance requested
cdf
probe
affy
altcdfenvs
cdf
probe
affy
altcdfenvs
updated 12.9 years ago by
James W. MacDonald
65k • written 12.9 years ago by
Ariel Grostern
▴ 80
0
votes
0
replies
910
views
Resend: altcdfenvs: mapping probes and creating new probe sets: guidance requested
cdf
probe
affy
altcdfenvs
cdf
probe
affy
altcdfenvs
12.9 years ago
Ariel Grostern
▴ 80
0
votes
0
replies
1.0k
views
Converting makeProbePackage in AnnotationDbi to permit PM-only arrays
cdf
probe
affy
altcdfenvs
cdf
probe
affy
altcdfenvs
12.9 years ago
Ariel Grostern
▴ 80
0
votes
0
replies
890
views
affy: adding new probe set definitions and making rma expression summaries
probe
affy
altcdfenvs
probe
affy
altcdfenvs
18.8 years ago
Mette Langaas
▴ 10
0
votes
0
replies
971
views
FW: makecdfenv()
GO
cdf
PROcess
altcdfenvs
GO
cdf
PROcess
altcdfenvs
19.8 years ago
Lana Schaffer
▴ 80
0
votes
0
replies
910
views
RE: altcdfenvs error
cdf
probe
altcdfenvs
cdf
probe
altcdfenvs
19.1 years ago
Wu, Xiwei
▴ 350
12 results • Page
1 of 1
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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
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