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Tillinghast, Guy, M.D.
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Gordon Smyth
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Answer: Subsetting data verses contrasts [DESeq2]?
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ATpoint
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This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …
Comment: Bulk RNAseq analysis for
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Mariami
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Thank you so much for your help! will try to proceed with the suggestion
Comment: Bulk RNAseq analysis for
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Mariami
•
0
Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N.
My concern came from the o…
Answer: Bulk RNAseq analysis for
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Gordon Smyth
53k
All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…
Answer: Bulk RNAseq analysis for
by
James W. MacDonald
68k
In my experience, the within-clone variability of differentiated stem cells is often as large or larger than the between-clone variability,…
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