Bioconductor Bambu

Showing : bambu • reset

votes

replies

1.3k

views

txdb bambu

updated 2.3 years ago by andre_sim ▴ 20 • written 2.3 years ago by camilia.savitri • 0

votes

902

views

bambu

updated 2.9 years ago by Jonathan Göke ▴ 60 • written 2.9 years ago by Sheetal • 0

votes

replies

1.2k

views

BAMBU bambu

updated 2.9 years ago by Sheetal • 0 • written 3.0 years ago by Seongwoo Han ▴ 10

vote

933

views

BAMBU bambu

updated 3.0 years ago by Andre ▴ 20 • written 3.0 years ago by Seongwoo Han ▴ 10

vote

replies

1.1k

views

BAMBU bambu

3.0 years ago Seongwoo Han ▴ 10

5 results • Page 1 of 1

Recent ...

Replies

Answer: Help with defining groups by Gordon Smyth 53k

Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…

Comment: Sharing a collection of datasets in ExperimentHub by Peter Hickey ▴ 760

The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ReinholdGaylord99 • 0

Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by Gordon Smyth 53k

I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0

Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …

Votes

Comment: readDNAStringSet with non DNA characters

Awards • All