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new window cairo bundle Re: [Rd] R/Sweave/cairo/freetype bug fix.
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10.9 years ago
Hin-Tak Leung
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Agilent Arrays
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Naomi Altman
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differences or 1-channel (was Re: Agilent Arrays)
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18.8 years ago
Naomi Altman
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Bioconductor Digest, Vol 28, Issue 23
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updated 18.8 years ago by
Wolfgang Huber
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Gordon Smyth
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Affymetrix Software Development Conference Early Registration rat es - final days
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21.0 years ago
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Answer: Why p value inconsistent when using different number of pathway score?
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ATpoint
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Same answer as here: https://support.bioconductor.org/p/9157606/ Adding or removing data (samples, genes, pathways, observations...) chang…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
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Chris
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Thanks Robert!
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
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Robert Castelo
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Hi, your `c2` object storing all the gene sets is probably a `list` object, where element names are the names of the pathways given by MSig…
Comment: Differential peaks that were not identified in diffbind were identified in diseq
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lonn
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I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
Answer: Cannabis and KEGGgraph
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deeenes
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Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
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Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
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