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News: Bioconductor 2021 Scholarship and Caregiver Awards
Bioc2021 Conference
3.8 years ago shepherl 4.1k
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News: Nominations for Bioconductor 2021 Awards!
Bioconductor Bioc2021 Recognition Awards
3.9 years ago shepherl 4.1k
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News: Long-term Bioconductor Contribution Award
Bioconductor Bioc2021 Recognition Awards
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News: Scientific or Informatic Technology Advancement Award!
Bioconductor Bioc2021 Recognition Awards
3.9 years ago shepherl 4.1k
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News: Bioconductor Award for Outstanding Documentation
Bioc2021 Awards Recognition Bioconductor
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News: Community engagement, outreach, and diversity award
awards bioc2021 recognition community Bioconductor
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News: Support Site Bioconductor Award
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4.0 years ago shepherl 4.1k
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News: Nominations for Bioconductor 2021 Awards!
Awards Recognition Bioconductor Bioc2021
4.0 years ago shepherl 4.1k
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News: Bioc2021 Registration is Open
Conference Bioc2021
4.0 years ago shepherl 4.1k
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News: Submission Deadline for Bioc2021 Next Week!
Conference Bioc2021
updated 4.1 years ago by ★ 1.1k • written 4.1 years ago by 4.1k
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News: BioC2021 organizing committee
BioC2021 S4Vectors
4.5 years ago Levi Waldron ★ 1.1k
11 results • Page 1 of 1
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Comment: GSEA preranked analysis downstream of DEseq2 by Ajay • 0
`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1] [1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/
Comment: error in ChAMP loading file by janwilseo • 0
Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)
Answer: CluserProfiler message "No gene can be mapped" by James W. MacDonald 68k
Two things. First, the order of your term2gene is backwards (should be term and then gene, like the name), and by default `enricher` adjust…
Comment: Controlling for batch and estrus cycle using DESeq2 in RNA-seq analysis by donnycrimson • 0
One potential workaround might be to adjust for these factors using a combination of design matrices perhaps including batch as a covariate…
Comment: DESeq2 Design controlling for gender by donnycrimson • 0
On a lighter note, while you are tackling such complex data, you might enjoy a quick break playing the [Slope Game](https://slopegame.lol)…
Votes
DiffBind; Error: No sites have activity greater than filter value
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
How to remove X & Y chromosome genes from RNAseq data
Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?
A: Unbalanced experiment with multiple samples from each patient.
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