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News:
BioC2024 registration is now open!
BioC2024
Conference
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Community
7 weeks ago
Maria Doyle
▴ 70
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News:
Bioconductor.org website new design - We Need Your Input!
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8 months ago
Maria Doyle
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News:
Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
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BioC2023
11 months ago
Maria Doyle
▴ 70
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RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
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11 months ago
Maria Doyle
▴ 70
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Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
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12 months ago
Maria Doyle
▴ 70
1
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News:
Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
Training
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News
12 months ago
Maria Doyle
▴ 70
0
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0
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507
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News:
EuroBioC2023 abstract submission closing soon!
presentation
EuroBioc2023
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Bioconductor
12 months ago
Maria Doyle
▴ 70
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1.2k
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News:
BioC2023 abstract submission is now open!
presentation
BioC2023
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Bioconductor
written 14 months ago by
Maria Doyle
▴ 70
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454
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News:
EuroBioC2023 abstract submission is open!
presentation
EuroBioC2023
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Bioconductor
14 months ago
Maria Doyle
▴ 70
0
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0
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465
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News:
Bioconductor call for events!
Bioconductor
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14 months ago
Maria Doyle
▴ 70
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News:
Join the Community Advisory Board -- upcoming elections -- deadline Today
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CAB
bioconductoroversight
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written 16 months ago by
shepherl
3.8k
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News:
Seeking members for BioC2023 organizing committee
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Bioconductor
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15 months ago
Maria Doyle
▴ 70
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Seeking Outreachy interns and project proposals
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15 months ago
Maria Doyle
▴ 70
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587
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Translation Hackathon (community event) announcement
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22 months ago
kozo.nishida
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Job:
Bioconductor Community Manager
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Teaching
Bioconductor
23 months ago • updated 22 months ago
Matthew Ritchie
▴ 1000
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News:
Join the Bioconductor Community Advisory Board -- Deadline this Friday February 25
bioconductoroversight
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2.2 years ago
shepherl
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2.3 years ago • updated 2.2 years ago
shepherl
3.8k
3
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News:
Call for Community Volunteered Package Reviewers
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Bioconductor
2.8 years ago
shepherl
3.8k
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798
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Bioconductor
3.0 years ago
Charlotte Soneson
▴ 170
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806
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News:
Community engagement, outreach, and diversity award
awards
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recognition
community
Bioconductor
3.0 years ago
shepherl
3.8k
2
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873
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News:
New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight
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BiocVersion
3.1 years ago
Matthew Ritchie
▴ 1000
4
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2.2k
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BiocVersion
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updated 3.2 years ago by
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• 0 • written 3.2 years ago by
Matthew Ritchie
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News:
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4.1 years ago
Matthew Ritchie
▴ 1000
7
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1.4k
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News:
Bioconductor Community Advisory Board Nominees
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bioconductor oversight
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updated 4.2 years ago by
Sean Davis
21k • written 4.2 years ago by
Matthew Ritchie
▴ 1000
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726
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News:
Results: Bioconductor Community Survey
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feedback
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4.2 years ago
Matthew Ritchie
▴ 1000
3
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4.6 years ago
Matthew Ritchie
▴ 1000
27 results • Page
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Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
Are you commenting on the OP's question, or adding a different question? If the latter, please start a new post rather than piggybacking on…
Answer: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Use `bquote`. See section 4.6 in [the vignette][1]. [1]: https://bioconductor.org/packages/release/bioc/vignettes/EnhancedVolcano/in…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
SamGG
▴ 350
I was thinking about removing unwanted variations at the sample level (ie a transformation shared across genes) not at the gene level. Corr…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
That's an assumption used for normalization of a sample, not an assumption you can use for an individual model. We always normalize to atte…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
SamGG
▴ 350
Is useless the assumption that the majority of genes have no variation in expression (bearing in mind that they are distributed over the en…
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biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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