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News: Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
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6 days ago Maria Doyle ▴ 20
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News: RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
Bioconductor Event Community Training
29 days ago Maria Doyle ▴ 20
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News: Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
Training Bioconductor Event Community Tutorial
5 weeks ago Maria Doyle ▴ 20
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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5 weeks ago Maria Doyle ▴ 20
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News: EuroBioC2023 abstract submission closing soon!
presentation EuroBioc2023 Conference community Bioconductor
6 weeks ago Maria Doyle ▴ 20
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News: BioC2023 abstract submission is now open!
presentation BioC2023 Conference community Bioconductor
updated 11 weeks ago by • 0 • written 3 months ago by ▴ 20
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News: EuroBioC2023 abstract submission is open!
presentation EuroBioC2023 Conference community Bioconductor
3 months ago Maria Doyle ▴ 20
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News: Bioconductor call for events!
Bioconductor events community
3 months ago Maria Doyle ▴ 20
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News: Join the Community Advisory Board -- upcoming elections -- deadline Today
Bioconductor CAB bioconductoroversight community
5 months ago • updated 4 months ago shepherl 3.5k
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News: Seeking members for BioC2023 organizing committee
BioC2023 Bioconductor community
4 months ago Maria Doyle ▴ 20
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News: Seeking Outreachy interns and project proposals
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4 months ago Maria Doyle ▴ 20
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News: Translation Hackathon (community event) announcement
event translation community
11 months ago kozo.nishida • 0
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Job: Bioconductor Community Manager
Community Teaching Bioconductor
12 months ago • updated 11 months ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board -- Deadline this Friday February 25
bioconductoroversight community CAB
15 months ago shepherl 3.5k
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News: Join the Bioconductor Community Advisory Board
bioconductoroversight community CAB
16 months ago • updated 15 months ago shepherl 3.5k
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News: Call for Community Volunteered Package Reviewers
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23 months ago • updated 22 months ago shepherl 3.5k
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News: Nominations for Bioconductor Technical Advisory Board are open
community Bioconductor
2.1 years ago Charlotte Soneson ▴ 170
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News: Community engagement, outreach, and diversity award
awards bioc2021 recognition community Bioconductor
2.1 years ago shepherl 3.5k
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News: New Bioconductor Community Advisory Board Members for 2021
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2.2 years ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board
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updated 2.3 years ago by • 0 • written 2.3 years ago by ▴ 1000
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News: Community engagement and outreach award
bioconductor bioc2020 award community News
written 3.0 years ago by 3.5k
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News: Bioconductor Community Advisory Board Members
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3.2 years ago Matthew Ritchie ▴ 1000
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News: Bioconductor Community Advisory Board Nominees
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updated 3.3 years ago by 21k • written 3.3 years ago by ▴ 1000
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News: Results: Bioconductor Community Survey
community feedback News
3.3 years ago Matthew Ritchie ▴ 1000
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News: Bioconductor Community Survey
feedback community News
3.7 years ago Matthew Ritchie ▴ 1000
25 results • Page 1 of 1
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Answer: Extract Limma Adjusted Values for Plotting by James W. MacDonald 63k
You should use `removeBatchEffect` for that.
Comment: Interpret plot from DiffBind by Chris • 0
Thank you for the explanation! The purple (**gain**) in the control in the right bottom corner but on the y axis is labeled **loss** which …
Comment: Use with_go along with other filters in getBM function by RuBBiT0 ▴ 10
Thank you! I think that makes much sense to me.
Comment: Interpret plot from DiffBind by Rory Stark ★ 4.9k
Not necessarily. It look to me like there is reconfiguring going on, with some chromatin that was open in the control becoming closed (the …
Comment: Interpret plot from DiffBind by Chris • 0
Thanks Rory! So that means the diseased sample has chromatin more open then the control one, is that correct?
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Answer: NA transcript values in my Txdb
Comment: Interpret plot from DiffBind
Answer: Use with_go along with other filters in getBM function
Answer: Use with_go along with other filters in getBM function
Answer: Interpret plot from DiffBind
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