Bioconductor S4Vectors

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117

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S4Vectors

updated 6 hours ago by Hervé Pagès 16k • written 1 day ago by Dario Strbenac ★ 1.5k

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571

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S4Vectors

written 4 months ago by Michael Steinbaugh ▴ 90

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423

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S4Vectors Aspli

updated 7 months ago by Sophie • 0 • written 8 months ago by salvocomplicazioni1 • 0

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1.4k

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S4Vectors DataFrame haven_labelled haven

updated 9 months ago by Danny Smith ▴ 20 • written 9 months ago by Daniel E. Weeks ▴ 20

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871

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S4Vectors DESeq2

updated 15 months ago by ATpoint ★ 3.4k • written 15 months ago by Habib • 0

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1.6k

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S4Vectors pagoo

15 months ago MauriAndres • 0

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1.1k

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GenomicRanges methylKit S4Vectors

updated 18 months ago by James W. MacDonald 63k • written 18 months ago by hasche • 0

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827

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S4Vectors

updated 20 months ago by Hervé Pagès 16k • written 21 months ago by Charles Plessy ▴ 180

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717

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GRangesList S4Vectors

updated 22 months ago by Hervé Pagès 16k • written 22 months ago by hauken_heyken ▴ 80

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1.5k

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S4Vectors

23 months ago Richard • 0

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1.6k

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S4Vectors

updated 2.3 years ago by James W. MacDonald 63k • written 2.3 years ago by Dario Strbenac ★ 1.5k

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613

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S4Vectors

updated 2.3 years ago by Marcel Ramos 680 • written 2.3 years ago by Dario Strbenac ★ 1.5k

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1.4k

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S4Vectors

updated 2.8 years ago by Hervé Pagès 16k • written 2.8 years ago by ilysR • 0

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549

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BioC2021 S4Vectors

2.9 years ago Levi Waldron 1.1k

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1.1k

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deseq2 S4Vectors

updated 3.4 years ago by Martin Morgan 25k • written 3.4 years ago by margarita.bogorad • 0

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1.3k

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S4Vectors

3.6 years ago Panos Balomenos • 0

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2.9k

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S4Vectors GenomicRanges BiocManager

4.0 years ago james.dalgleish ▴ 30

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598

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S4Vectors methods

4.0 years ago Aditya ▴ 160

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618

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S4Vectors DataFrame

4.1 years ago maltethodberg ▴ 170

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1.3k

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s4vectors iranges

updated 4.1 years ago by Michael Lawrence 11k • written 4.1 years ago by Michael Steinbaugh ▴ 90

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1.2k

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GenomicRanges rtracklayer VariantAnnotation S4Vectors SummarizedExperiment

updated 4.2 years ago by Steve Lianoglou 13k • written 4.2 years ago by james.dalgleish ▴ 30

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1.0k

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s4vectors

updated 4.4 years ago by Michael Love 40k • written 4.4 years ago by z.crane-smith • 0

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704

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DataFrame S4Vectors

updated 4.4 years ago by Michael Lawrence 11k • written 4.4 years ago by Laurent Gatto 1.6k

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1.9k

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GOSemSim S4Vectors

4.5 years ago sergi.picart ▴ 20

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1.8k

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R S4Vectors segfault

updated 4.6 years ago by Martin Morgan 25k • written 4.6 years ago by ecg1g15 ▴ 20

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969

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DataFrame subsetting S4Vectors

updated 4.7 years ago by Hervé Pagès 16k • written 4.7 years ago by felix.ernst • 0

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1.3k

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GenomicRanges S4Vectors dplyr

updated 4.7 years ago by James W. MacDonald 63k • written 4.7 years ago by liz.ingsimmons ▴ 140

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1.6k

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S4Vectors IRanges XVector GenomicRanges scran

updated 4.7 years ago by Aaron Lun ★ 28k • written 4.7 years ago by Momo • 0

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1.3k

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S4Vectors R-3.5.1

4.8 years ago zhang303 • 0

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2.9k

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deseq2 S4Vectors

updated 4.8 years ago by Martin Morgan 25k • written 4.8 years ago by roghaiyeh.safari • 0

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1.5k

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bioconductor iranges s4vectors xvector r 3.3.2

updated 5.2 years ago by becker.gabriel ▴ 10 • written 5.2 years ago by chokoiboko • 0

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764

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iranges s4vectors rle rlelist

5.3 years ago endrebak85 ▴ 30

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1.7k

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s4vectors copywriter

updated 5.4 years ago by Michael Lawrence 11k • written 5.4 years ago by TriS ▴ 200

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725

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s4vectors

5.7 years ago Michael Love 40k

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2.2k

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ubuntu biocgenerics s4vectors IRanges annotationdbi

updated 5.8 years ago by Martin Morgan 25k • written 5.8 years ago by KRA • 0

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1.2k

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s4vectors hits

updated 5.8 years ago by Michael Lawrence 11k • written 5.8 years ago by maltethodberg ▴ 170

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1.4k

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package installation s4vectors

updated 6.0 years ago by Martin Morgan 25k • written 6.0 years ago by dchmiller • 0

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3.2k

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deseq2 deseq merge data frames cbind s4vectors

updated 6.0 years ago by Michael Love 40k • written 6.0 years ago by kirannbishwa01 • 0

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1.1k

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s4vectors bumphunter txdb.hsapiens.ucsc.hg38.knowngene

6.0 years ago Leonardo Collado Torres ★ 1.0k

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2.0k

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S4Vectors ifelse

updated 6.2 years ago by balwierz ▴ 40 • written 8.1 years ago by Peter Langfelder ★ 2.8k

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817

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S4Vectors

updated 6.4 years ago by Michael Lawrence 11k • written 6.4 years ago by fedor • 0

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1.8k

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s4vectors dataframe

updated 6.6 years ago by Hervé Pagès 16k • written 6.6 years ago by Welliton de Souza ▴ 70

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2.2k

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S4Vectors Matrix

6.6 years ago peter.kharchenko ▴ 30

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1.4k

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Package s4vectors

updated 6.9 years ago by Martin Morgan 25k • written 6.9 years ago by my4 ▴ 10

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781

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s4vectors

updated 7.0 years ago by Michael Lawrence 11k • written 7.0 years ago by vedran.franke • 0

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1.2k

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r s4vectors integerlist iranges

updated 7.0 years ago by Michael Lawrence 11k • written 7.0 years ago by jian_liangli • 0

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768

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s4vectors IRanges

updated 7.0 years ago by Martin Morgan 25k • written 7.0 years ago by li lilingdu ▴ 450

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1.4k

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coercion data manipulation s4vectors List

7.2 years ago Jurat Shahidin ▴ 80

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1.1k

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mclust s4vectors S4 as.matrix .FCS

7.2 years ago anara92 • 0

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1.4k

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s4vectors genomicranges

updated 7.3 years ago by Michael Lawrence 11k • written 7.3 years ago by Leonardo Collado Torres ★ 1.0k

50 results • Page 1 of 1

Recent ...

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Comment: LIMMA dupcor() function time issue. by Gordon Smyth 48k

That's ok, but there is nothing to be gained by subsetting 1000 times. It would be better to simply subset 100,000 rows once, although the …

Comment: Specifying evidence channels in STRINGdb by robynne.braun • 0

Also I found prior thread here addressing the same question with response that functionality will be supported someday. This was a few year…

Comment: Problems with FLOWAI by SHASHI • 0

please try this using short path name and keeping your fcs file and wsp file in your local directory https://youtu.be/xLeqE7PNYzA

Comment: DataFrame Construction With Non-standard Column by Hervé Pagès 16k

SimpleList is a List derivative and List derivatives in general don't need protection. For example, a GRangesList object (which is also a L…

Answer: Deseq2, how to model design for comparing Mutant mouse at age 14 days versus Mu by swbarnes2 ★ 1.3k

The Status grouping you show above is good to use if you want to simply compare one subset of samples to another subset. The ~Genotype +…

Votes

Answer: Deseq2, enrichGO and ensembl ID

A: LIMMA dupcor() function time issue.

Answer: Further analysis after limma regression output

A: collapseReplicates in DESeq2

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