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bridge
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Nonorthogonal multiple comparisons in Limma/ Books on Bayesian Statistics
Bayesian
Classification
limma
bridge
Bayesian
Classification
limma
bridge
19.7 years ago
Gordon Smyth
50k
0
votes
3
replies
1.2k
views
chippeakanno:::addGeneID for adding gene symbol etc. to annotatedPeak or enrichedGO
Annotation
convert
biomaRt
bridge
ChIPpeakAnno
Annotation
convert
biomaRt
bridge
updated 12.7 years ago by
Andreia Fonseca
▴ 810 • written 12.7 years ago by
Julie Zhu
★ 4.3k
0
votes
3
replies
1.5k
views
AnnBuilder/ABPkgBuilder: lots of Errors
Annotation
GO
Cancer
Organism
Biobase
annotate
AnnBuilder
PROcess
bridge
Annotation
GO
updated 19.6 years ago by
John Zhang
★ 2.9k • written 19.7 years ago by
Floor Stam
▴ 90
1
vote
3
replies
2.2k
views
views on Rle using GRanges object
RNASeq
Coverage
GO
Cancer
bridge
rtracklayer
IRanges
RNASeq
Coverage
GO
Cancer
bridge
updated 10.1 years ago by
Hervé Pagès
16k • written 10.1 years ago by
Michael Lawrence
★ 11k
0
votes
2
replies
3.5k
views
failure in GDS2eSet() in package GEOquery
Microarray
OneChannel
TwoChannel
DataImport
bridge
GEOquery
Microarray
OneChannel
bridge
updated 16.5 years ago by
Sean Davis
21k • written 16.5 years ago by
Wittner, Ben
▴ 290
0
votes
0
replies
689
views
chippeakanno related
Annotation
annotate
convert
biomaRt
bridge
Annotation
annotate
convert
biomaRt
bridge
12.7 years ago
Julie Zhu
★ 4.3k
0
votes
0
replies
1.1k
views
ensemblVEP, variant_effect_predictor versions and release schedule
Cancer
MLInterfaces
bridge
ensemblVEP
AnnotationHub
Cancer
MLInterfaces
bridge
ensemblVEP
10.3 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
769
views
anybody parsing BioPAX 2?
bridge
bridge
13.9 years ago
Emek Demir
▴ 10
0
votes
0
replies
896
views
Nonorthogonal multiple comparisons in Limma/ Books on Bayesian Statistics
Bayesian
Cancer
limma
bridge
Bayesian
Cancer
limma
bridge
19.7 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
800
views
The anion is a six-coordinate complex with a distorted octahedral geometry around NiII.
bridge
inveRsion
bridge
inveRsion
16.8 years ago
Bean Y. Nat
▴ 10
0
votes
0
replies
2.2k
views
Prestigious Research Fellowship in Biostatistics/Bioinformatics
Microarray
Survival
Infrastructure
Cancer
Breast
bridge
Microarray
Survival
Infrastructure
19.9 years ago
Wei, Wenbin
▴ 50
0
votes
0
replies
806
views
chippeakanno related
Annotation
convert
biomaRt
bridge
Annotation
convert
biomaRt
bridge
12.8 years ago
Julie Zhu
★ 4.3k
12 results • Page
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Comment: Why p value inconsistent when using different number of pathway score?
by
Chris
• 0
Hi Robert, if two conditions don't have hundreds of differential express genes ( in some conditions such as peripheral blood Alzheimer vs n…
Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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