Bioconductor Bsgenomeforge

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BSgenomeForge

8 months ago Bruno • 0

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BSgenomeForge BSgenome

updated 11 months ago by James W. MacDonald 65k • written 11 months ago by kyliecode • 0

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BSGenomeForge BSGenome

updated 3.1 years ago by Hervé Pagès 16k • written 3.1 years ago by sieminsk • 0

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cleanUpdTSeq BSgenome BSgenomeForge

updated 5.2 years ago by Julie Zhu ★ 4.3k • written 5.2 years ago by danielle.bilodeau • 0

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BSgenomeForge

7.6 years ago • updated 7.5 years ago Vijay Lakhujani • 0

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Comment: Create protein sequences including variants from a VCF file by Yun • 0

This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object

Comment: Can log2cpm be used for proteomics data normalization? by Daniel • 0

Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

Thanks again Guido, I will try to run the script you have suggested and see if I can install the package. Yes, I have seen this message a…

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Guido Hooiveld ★ 4.0k

FWIW: based on [previous posts][1] it is suggested to install like this: install.packages(pkgs="./org.Vdahliae.eg.db", repos=NULL, typ…

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Comment: How to correctly adjust for gender in edgeR

Create protein sequences including variants from a VCF file

A: DEXSeq design formula

Answer: SGSeq: moving toward diffex from SGSeq analysis

Answer: How to design DEXSeq formula for multiple variables

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Popular Question to Vincent J. Carey, Jr. 6.7k