Bioconductor BSGenomeForge

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489

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BSgenome BSgenomeForge

updated 4 months ago by James W. MacDonald 68k • written 4 months ago by mat149 ▴ 80

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1.9k

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BSgenomeForge

updated 9 months ago by James W. MacDonald 68k • written 9 months ago by JABEZ RAJU • 0

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709

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BSgenomeForge non-modelorganism unabletofindFTPdir

updated 15 months ago by Hervé Pagès 16k • written 15 months ago by Geetha • 0

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763

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BSgenomeForge

2.4 years ago Bruno • 0

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3.7k

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BSgenomeForge BSgenome

updated 2.7 years ago by James W. MacDonald 68k • written 2.7 years ago by kyliecode • 0

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2.5k

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BSGenomeForge BSGenome

updated 4.8 years ago by Hervé Pagès 16k • written 4.8 years ago by sieminsk • 0

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2.4k

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cleanUpdTSeq BSgenome BSgenomeForge

updated 6.9 years ago by Julie Zhu ★ 4.3k • written 6.9 years ago by danielle.bilodeau • 0

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1.6k

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BSgenomeForge

9.4 years ago • updated 9.3 years ago Vijay Lakhujani • 0

8 results • Page 1 of 1

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Comment: GOseq Probability Weight Function bad fit by a2sahaaaq2c • 0

the mobile gaming world offers a different kind of strategic challenge. Many users today are shifting from heavy data processing to lighthe…

Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0

Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…

Comment: DiffBind plot.profile error by a2sahaaaq2c • 0

To resolve technical errors like installation failures or login issues, first ensure your device allows in the security settings and that…

Comment: soGGi error by shepherl 4.3k

We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…

Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k

No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.

Votes

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

C: Why limma, edgeR, and DESeq did not implement fold change moderation first?

Comment: using limma trend workflow in CAMERA

C: z-score with DESeq2?

Awards • All

Popular Question to Guido Hooiveld ★ 4.1k