Bioconductor BSgenomeForge

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BSgenomeForge

11 days ago Bruno • 0

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370

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BSgenomeForge BSgenome

updated 3 months ago by James W. MacDonald 63k • written 3 months ago by kyliecode • 0

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1.3k

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BSGenomeForge BSGenome

updated 2.5 years ago by Hervé Pagès 16k • written 2.5 years ago by sieminsk • 0

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cleanUpdTSeq BSgenome BSgenomeForge

updated 4.6 years ago by Julie Zhu ★ 4.3k • written 4.6 years ago by danielle.bilodeau • 0

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BSgenomeForge

7.0 years ago • updated 6.9 years ago Vijay Lakhujani • 0

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Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10

I don't know the details but do you mean using `HDF5RealizationSink` or `TENxRealizationSink` will make it possible to writing sparse multi…

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Ok, I understood. How about "writing" to HDF5? Are you going to implement `write_block_as_sparse` in `SparseArray` package?

Comment: DelayedArray::read_sparse_block by Hervé Pagès 16k

> So do you means the specification change from DelayedArray's read_sparse_block to SparseArray's read_block_as_sparse will accelerate the …

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Thanks for your reply. So do you means the specification change from `DelayedArray`'s `read_sparse_block` to `SparseArray`'s `read_block_a…

Comment: DMRcate design by James W. MacDonald 63k

That's what identical context means.

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Answer: What MetaPhlAn3 database was used in cMD 3?

Comment: Speeding up of DelayedArray::write_block()

Answer: DelayedArray::read_sparse_block

Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available

Comment: Timely differentially expressed genes

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