Bioconductor CBioPortalData

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cBioPortalData

updated 8 months ago by Marcel Ramos 700 • written 8 months ago by Astrid Deschênes • 0

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cBioPortalData

13 months ago karam • 0

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cBioPortalData

2.3 years ago • updated 2.2 years ago ryan.hagenson • 0

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RaggedExperiment cBioPortalData

updated 2.2 years ago by Marcel Ramos 700 • written 2.3 years ago by ryan.hagenson • 0

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cBioPortalData

updated 16 months ago by Ndimensional ▴ 20 • written 3.6 years ago by andreas.wernitznig • 0

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MultiAssayExperiment cBioPortalData

updated 3.6 years ago by Kevin Blighe ★ 4.0k • written 3.6 years ago by Javier • 0

6 results • Page 1 of 1

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Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

Thank you. If I have questions about QC/normalization, do I ask them here or ask a new question?

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Answer: ANOVA like approach of edgeR

Comment: ANOVA like approach of edgeR

Answer: Detecting genomic signatures of drug resistance breast cancer in transcriptom

Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (

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