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cghmcr
•
reset
0
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754
views
Error run cghMCR function in cghMCR package
cghmcr
6.5 years ago
ljia1180
• 0
0
votes
1
reply
1.1k
views
SGOL plot
cghMCR
cghMCR
updated 8.9 years ago by
pascal.gellert
• 0 • written 12.5 years ago by
viritha kaza
▴ 580
0
votes
2
replies
1.2k
views
questions on cghMCR package
DNAcopy
cghMCR
DNAcopy
cghMCR
updated 12.3 years ago by
Martin Morgan
25k • written 12.3 years ago by
nac
▴ 280
0
votes
0
replies
1.0k
views
Fwd: seeking help on cghMCR pleeeease
DNAcopy
cghMCR
DNAcopy
cghMCR
12.4 years ago
nac
▴ 280
0
votes
0
replies
971
views
seeking help on cghMCR pleeeease
DNAcopy
cghMCR
DNAcopy
cghMCR
12.4 years ago
nac
▴ 280
0
votes
0
replies
1.0k
views
Help on cghMCR units of gapAllowed
DNAcopy
cghMCR
DNAcopy
cghMCR
12.4 years ago
nac
▴ 280
0
votes
0
replies
1.2k
views
cghMCR package:Is it possible to find MCR by not usingDNAcopy object?
PROcess
DNAcopy
cghMCR
PROcess
DNAcopy
cghMCR
12.6 years ago
viritha kaza
▴ 580
0
votes
1
reply
1.3k
views
cghMCR package:Is it possible to find MCR by not using DNAcopy object?
DNAcopy
cghMCR
DNAcopy
cghMCR
updated 12.6 years ago by
Jianhua Zhang
▴ 20 • written 12.6 years ago by
viritha kaza
▴ 580
0
votes
0
replies
842
views
problem with readPositionalInfo() for Nimblegen for ArrayCGH
snapCGH
cghMCR
snapCGH
cghMCR
12.8 years ago
Muksitul Haque
▴ 10
0
votes
1
reply
848
views
vector size issue in CGHMCR
cghMCR
cghMCR
updated 13.1 years ago by
Sean Davis
21k • written 13.1 years ago by
nac
▴ 280
0
votes
0
replies
1.2k
views
cghMCR package - Jianhua Zhang
DNAcopy
cghMCR
DNAcopy
cghMCR
14.3 years ago
Luz G Alonso
▴ 20
0
votes
0
replies
826
views
Converting Seglist to segments file
Cancer
convert
DNAcopy
snapCGH
cghMCR
Cancer
convert
DNAcopy
snapCGH
cghMCR
16.8 years ago
Daniel Brewer
★ 1.9k
0
votes
1
reply
829
views
cghMCR bug?
Cancer
DNAcopy
cghMCR
Cancer
DNAcopy
cghMCR
updated 17.3 years ago by
John Zhang
★ 2.9k • written 17.3 years ago by
Ramon Diaz
★ 1.1k
13 results • Page
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Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
• 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Comment: Store output of matchPWM()
by
James W. MacDonald
65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Comment: DEseq2 coefficient
by
JKim
• 0
Hi Dr. Love, I'm sorry to ask another question to my old post. If the design isn't balanced, the interpretation of coefficients will be…
Votes
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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