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Comment: Test of Multiple Linear Combination on coefficients from Wald Test in Deseq2
by
David W. H.
• 0
Thank you for your reply. After a long period of study, I realized that I had misunderstood the workings of DESeq2. Thank you for your cle…
Answer: featureCounts error: Assertion `numOfBuckets > 0' failed
by
Yang Liao
▴ 440
Hi Jessica, thanks for sharing the data with us! We have identified the issue behind the error: the header is very long in the BAM file. In…
Comment: biomaRt getLDS error
by
Mike Smith
★ 6.5k
There was a bug causing it to fail with the search term 'mouse' which is now patched but hasn't propagated yet. Give it a try with "goril…
Comment: biomaRt getLDS error
by
mark.dunning
• 0
Sounds great, but not working for me for some reason. I'm trying to match Human to Dog and Human to Gorilla using Ensembl IDs. I just star…
Comment: makeOrgPackageFromGAF() error with gene ID "GID"
by
James W. MacDonald
66k
Are you trying to make a `TxDb` or an `OrgDb`? You say the former, but then appear to be trying to make the latter.
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Answer: Test of Multiple Linear Combination on coefficients from Wald Test in Deseq2
Answer: Deseq2 design formula and analysis with internal controls
Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data
Processing Nanostring GeoMX Q3 normalized data as intensities with Limma
Answer: Question on number of genes used in GO analysis
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