1
vote
18
replies
4.3k
views
1
vote
3
replies
2.2k
views
3
votes
1
reply
1.7k
views
updated 9.3 years ago by
Aaron Lun
★
29k
•
written 9.3 years ago by
nobishvarghese
•
0
2
votes
1
reply
1.3k
views
updated 9.3 years ago by
Aaron Lun
★
29k
•
written 9.3 years ago by
endrebak85
▴
40
1
vote
3
replies
1.4k
views
9.8 years ago • updated 9.4 years ago
asif.zubair
•
0
1
vote
1
reply
1.1k
views
updated 9.4 years ago by
Aaron Lun
★
29k
•
written 9.4 years ago by
asif.zubair
•
0
3
votes
2
replies
1.5k
views
updated 4.1 years ago by
uli.arb
•
0
•
written 9.4 years ago by
asif.zubair
•
0
3
votes
1
reply
1.1k
views
updated 9.4 years ago by
Aaron Lun
★
29k
•
written 9.4 years ago by
nobishvarghese
•
0
4
votes
1
reply
3.4k
views
updated 9.4 years ago by
Aaron Lun
★
29k
•
written 9.4 years ago by
markus.ringner
▴
10
2
votes
1
reply
1.8k
views
updated 9.4 years ago by
Aaron Lun
★
29k
•
written 9.4 years ago by
Ryan C. Thompson
★
7.9k
2
votes
3
replies
1.5k
views
updated 9.4 years ago by
Aaron Lun
★
29k
•
written 9.4 years ago by
Ryan C. Thompson
★
7.9k
1
vote
1
reply
1.9k
views
updated 9.4 years ago by
Aaron Lun
★
29k
•
written 9.4 years ago by
Amitha Sampath
▴
10
2
votes
2
replies
1.6k
views
2
votes
7
replies
1.8k
views
updated 9.5 years ago by
JoannaF
▴
10
•
written 10.4 years ago by
sergio.espeso-gil
•
0
6
votes
2
replies
1.6k
views
0
votes
5
replies
2.2k
views
1
vote
1
reply
1.4k
views
2
votes
1
reply
855
views
updated 9.9 years ago by
Aaron Lun
★
29k
•
written 9.9 years ago by
jerome.eeckhoute
•
0
4
votes
2
replies
1.8k
views
2
votes
3
replies
1.2k
views
updated 10.0 years ago by
Gordon Smyth
53k
•
written 10.0 years ago by
sergio.espeso-gil
•
0
2
votes
7
replies
1.7k
views
updated 10.0 years ago by
Gordon Smyth
53k
•
written 10.0 years ago by
sergio.espeso-gil
•
0
1
vote
1
reply
1.2k
views
updated 10.2 years ago by
Aaron Lun
★
29k
•
written 10.2 years ago by
Arne Muller
▴
20
1
vote
7
replies
1.5k
views
10.3 years ago
sergio.espeso-gil
•
0
3
votes
2
replies
3.9k
views
10.5 years ago
sergio.espeso-gil
•
0
4
votes
4
replies
2.1k
views
Recent ...
Replies
Answer: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg?
by
Michael Love
43k
I'm not familiar with this usage, or code here
```
normFactors <- exp(-1 * offst(set2))
```
In the RNA-seq gene-level workflow, we …
Answer: Which of apeglm and ashr may be more appropriate for pseudobulked DESeq2 analysi
by
Michael Love
43k
> apeglm appears much more aggressive in shrinkage, pushing many genes toward logFC = 0
> ashr maintains a gradient of shrinkage val…
Comment: voomLmFit fitted log-CPM values
by
Gordon Smyth
53k
The fitted values are on the log2CPM scale. I would have told you if they were not!
I think you may be getting confused by the differences…
Comment: voomLmFit fitted log-CPM values
by
Lina
▴
10
Is the output from fitted(v) in the log2 CPM scale? or CPM scale?
Answer: voomLmFit fitted log-CPM values
by
Gordon Smyth
53k
Fitted values are obtained from limma MArrayLM objects by
```
fitted(v)
```
Votes
Awards
• All
Popular Question to
Nik dAK
▴
10
Popular Question to
Michael
•
0
Popular Question to
sum31278
•
0
Popular Question to
Gordon Smyth
53k
Popular Question to
boczniak767
▴
740
Locations
• All
Faridabad, Haryana 121004, 23 minutes ago
USA, Los Angeles, USC, 1 hour ago
WEHI, Melbourne, Australia, 1 hour ago
WEHI, Melbourne, Australia, 1 hour ago
The city by the bay, 4 hours ago
Faridabad, Haryana 121004, 23 minutes ago
USA, Los Angeles, USC, 1 hour ago
WEHI, Melbourne, Australia, 1 hour ago
WEHI, Melbourne, Australia, 1 hour ago
The city by the bay, 4 hours ago
Traffic: 763 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6