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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
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Michael Love
41k
It sounds like you have more overlaps than by chance, is that what you would like to see?
Comment: ATACseqQC shiftGAlignmentsList() problem
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Ou, Jianhong
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Hi,
Thank you for trying ATACseqQC. Could you let me know the version of ATACseqQC you are using? And did you try to set `bigFile=TRUE` wh…
Answer: GENESIS: Can not use GdsGenotypeReader to read a gds file
by
Stephanie M. Gogarten
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870
`SeqVarTools` and `GWASTools` provide two alternate paths to working with files in `GENESIS`, depending on what type of GDS file you start …
Answer: GENESIS: Can not use GdsGenotypeReader to read a gds file
by
James W. MacDonald
64k
If you can open the file using `seqOpen` you should not expect that you will be able to open using `GdsGenotypeReader`.
```
> library(S…
Answer: Java error while running HiCDC overview code
by
James W. MacDonald
64k
This is a Bioconductor support site. You might try over at biostars.org, or better yet, ask on the GitHub where you got that package.
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