Showing : heatmaps • reset
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179
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Error when trying to create a heatmap with DESeq2
Heatmap RNA-seqanalysis heatmaps DESeq2
updated 5 weeks ago by ▴ 740 • written 5 weeks ago by • 0
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1
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270
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edgeR heatmap construction and interpretation
heatmaps
updated 6 weeks ago by 49k • written 7 weeks ago by • 0
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3
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270
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Installing Gpart
gpart heat heatmaps
updated 7 weeks ago by 64k • written 8 weeks ago by • 0
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2
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370
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Drawing a heatmap with only limited genes
heatmaps
updated 5 months ago by • 0 • written 5 months ago by • 0
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312
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Add 'ColSideColors' using 'heatmap.2' function
ColSideColors heatmaps heatmap.2
updated 8 months ago by ▴ 80 • written 8 months ago by ▴ 10
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373
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Heatmap of two conditions from the normalized gene count data
GeneExpression heatmaps
updated 9 months ago by ★ 3.6k • written 9 months ago by • 0
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2
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549
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How to use the plotExprHeatmap function to draw heat maps according to groups
grou heatmaps CyTOFpower cytofWorkflow
9 months ago shuangshuang • 0
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561
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WGCNA Heatmap and Export to Cytoscape Not Working
Cytoscape Heatmap heatmaps WGCNA
10 months ago gianni.drm • 0
0
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1
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425
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struggling to create a heatmap
DESeq2 heatmaps
updated 10 months ago by ★ 3.6k • written 10 months ago by ▴ 10
2
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3
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618
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How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 10 months ago by ▴ 40 • written 10 months ago by ▴ 10
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2
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477
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[DESeq2] There is no difference in expression in my heatmap
DESeq2 heatmaps
10 months ago Sooni ▴ 10
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5
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1.9k
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How to identify top most variable genes from log2 normalized data?
supervised edgeR variance RNASeq heatmaps
updated 10 months ago by 49k • written 11 months ago by ▴ 10
2
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5
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1.1k
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ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
11 months ago Katharina • 0
0
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1
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1.4k
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Heatmap with result DESeq analysis
DESeq2 results Heatmaps plots
updated 13 months ago by 41k • written 14 months ago by • 0
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3
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820
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Generate Heatmap from Gene Names after DESEQ2
DESeq2 DESEQ2 tximeta SummarizedExperiment heatmaps
updated 14 months ago by 64k • written 14 months ago by • 0
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1.2k
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Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 15 months ago by ▴ 240 • written 15 months ago by • 0
1
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782
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How fix lines of dendrogram that overlap in the column portion of a heatmap?
heat heatmaps
updated 17 months ago by 64k • written 17 months ago by • 0
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2
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2.8k
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Scaling for p.heatmap
heatmaps pheatmap scaling
17 months ago Bhavana • 0
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3
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959
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Persisting error in making a heatmap
heatmaps gplots
17 months ago beslinail • 0
1
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1
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643
views
Method for generating heatmap of overlapping DEGs?
heatm heatmaps
updated 19 months ago by 64k • written 19 months ago by • 0
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1
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835
views
Help me do a gene enrichment analysis
DESeq2 topGO heatmaps
updated 2.3 years ago by ▴ 40 • written 2.3 years ago by • 0
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2
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1.4k
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PCA and heatmaps: most variable genes selection
DESeq2 ExpressionData heatmaps pca
2.5 years ago Clara • 0
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1
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2.0k
views
Can you colour dendrogram branch clusters in pheatmap?
R heatmaps pheatmap
updated 2.8 years ago by 3.9k • written 2.8 years ago by ▴ 10
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1
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704
views
PCA rand heatmap of raw data
DESeq2 DiffSeq PrincipalComponent rlog heatmaps
updated 2.8 years ago by 41k • written 2.8 years ago by ▴ 30
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5
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1.2k
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DEseq2 results
heatmaps DEGs PCA
updated 2.8 years ago by 3.9k • written 2.8 years ago by • 0
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630
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How to generate input file for Bioconductor package heatmaps
heatmaps input file
updated 4.8 years ago by 64k • written 4.8 years ago by • 0
26 results • Page 1 of 1
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Answer: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by Peter Hickey ▴ 650
An example usually helps. Here's a way to do it using base R. ``` library(DropletUtils) # Mocking up some 10X HDF5-formatted data. out <-…
Answer: rDGIdb package inconsistency with web interface by James W. MacDonald 64k
It doesn't appear to be inconsistent. Here is the [API call result][1]. And the [query on the old version][2]. Although as you may be notin…
Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by Peter Hickey ▴ 650
Initially posted to https://github.com/MarioniLab/DropletUtils/issues/104
Comment: How to read fcs3.2 files by James W. MacDonald 64k
You need to supply more information than saying you tried things and they didn't work. Show code with error messages.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k
Looks good then.
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Answer: SingleR annotation of several slots/patients
Answer: List of Deprecated Packages for Bioc3.18
Attempting to import SBML file using R
Answer: RNASeq time course analysis, missing time points for control
Answer: biomaRt not working - lazy table error
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