Showing : heatmaps • reset
2
votes
5
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2.0k
views
Heatmap of rnaseq data with z-score scale
heatmaps RNASeq
updated 9 months ago by ▴ 110 • written 9 months ago by ▴ 10
1
vote
5
replies
1.8k
views
Heatmap of a transformed deseq object with pheatmap
DESeq2 heatmaps
updated 9 months ago by 68k • written 9 months ago by ▴ 10
0
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2
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1.2k
views
DESeq2 Heatmap
heatmaps
updated 13 months ago by ★ 1.4k • written 13 months ago by • 0
0
votes
3
replies
2.2k
views
Label specific rows in pheatmap
heatmaps pheatmap
updated 16 months ago by 68k • written 16 months ago by ▴ 50
1
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5
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2.6k
views
Heatmap from the output of GSEA clusterProfiler?
clusterProfiler heatmaps
written 18 months ago by • 0
2
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1
reply
2.0k
views
DESeq2 is it OK to scale transformed data in order to plot heatmaps?
DESeq2 heatmaps
updated 18 months ago by ★ 5.0k • written 18 months ago by • 0
0
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0
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542
views
Error in drawHeatmap function
GeneOverlap heatmaps
20 months ago Johanna • 0
0
votes
2
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1.4k
views
Cluster columns in Pheatmap
geneexp pheatmap heatmaps cluster
updated 21 months ago by 68k • written 21 months ago by • 0
0
votes
1
reply
3.0k
views
Error when trying to create a heatmap with DESeq2
Heatmap RNA-seqanalysis heatmaps DESeq2
updated 2.3 years ago by ▴ 780 • written 2.3 years ago by • 0
0
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1
reply
3.0k
views
edgeR heatmap construction and interpretation
heatmaps
updated 2.4 years ago by 53k • written 2.4 years ago by • 0
0
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3
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1.6k
views
Installing Gpart
gpart heat heatmaps
updated 2.4 years ago by 68k • written 2.4 years ago by • 0
0
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2
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1.4k
views
Drawing a heatmap with only limited genes
heatmaps
updated 2.7 years ago by • 0 • written 2.7 years ago by • 0
1
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1
reply
1.0k
views
Add 'ColSideColors' using 'heatmap.2' function
ColSideColors heatmaps heatmap.2
updated 2.9 years ago by ▴ 90 • written 2.9 years ago by ▴ 10
0
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1
reply
1.3k
views
Heatmap of two conditions from the normalized gene count data
GeneExpression heatmaps
updated 3.0 years ago by ★ 5.0k • written 3.0 years ago by • 0
0
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2
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2.0k
views
How to use the plotExprHeatmap function to draw heat maps according to groups
grou heatmaps CyTOFpower cytofWorkflow
3.0 years ago shuangshuang • 0
0
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0
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1.7k
views
WGCNA Heatmap and Export to Cytoscape Not Working
Cytoscape Heatmap heatmaps WGCNA
3.0 years ago gianni.drm • 0
0
votes
1
reply
1.5k
views
struggling to create a heatmap
DESeq2 heatmaps
updated 3.1 years ago by ★ 5.0k • written 3.1 years ago by ▴ 10
2
votes
3
replies
2.2k
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 3.1 years ago by ▴ 40 • written 3.1 years ago by ▴ 10
2
votes
2
replies
1.3k
views
[DESeq2] There is no difference in expression in my heatmap
DESeq2 heatmaps
3.1 years ago Sooni ▴ 10
4
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5
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7.0k
views
How to identify top most variable genes from log2 normalized data?
supervised edgeR variance RNASeq heatmaps
updated 3.0 years ago by 53k • written 3.2 years ago by ▴ 10
2
votes
5
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3.0k
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
3.2 years ago Katharina • 0
0
votes
1
reply
4.5k
views
Heatmap with result DESeq analysis
DESeq2 results Heatmaps plots
updated 3.4 years ago by 43k • written 3.4 years ago by • 0
0
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3
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2.4k
views
Generate Heatmap from Gene Names after DESEQ2
DESeq2 DESEQ2 tximeta SummarizedExperiment heatmaps
updated 3.4 years ago by 68k • written 3.4 years ago by • 0
0
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1
reply
2.7k
views
Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 3.5 years ago by ▴ 290 • written 3.5 years ago by • 0
1
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1
reply
1.8k
views
How fix lines of dendrogram that overlap in the column portion of a heatmap?
heat heatmaps
updated 3.7 years ago by 68k • written 3.7 years ago by • 0
0
votes
2
replies
9.2k
views
Scaling for p.heatmap
heatmaps pheatmap scaling
3.7 years ago Bhavana • 0
0
votes
3
replies
2.2k
views
Persisting error in making a heatmap
heatmaps gplots
3.7 years ago beslinail • 0
1
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1
reply
1.5k
views
Method for generating heatmap of overlapping DEGs?
heatm heatmaps
updated 3.9 years ago by 68k • written 3.9 years ago by • 0
0
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1
reply
1.8k
views
Help me do a gene enrichment analysis
DESeq2 topGO heatmaps
updated 4.5 years ago by ▴ 40 • written 4.5 years ago by • 0
0
votes
2
replies
2.5k
views
PCA and heatmaps: most variable genes selection
DESeq2 ExpressionData heatmaps pca
4.7 years ago Clara ▴ 10
1
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1
reply
3.8k
views
Can you colour dendrogram branch clusters in pheatmap?
R heatmaps pheatmap
updated 5.0 years ago by ★ 4.0k • written 5.0 years ago by ▴ 10
1
vote
1
reply
1.5k
views
PCA rand heatmap of raw data
DESeq2 DiffSeq PrincipalComponent rlog heatmaps
updated 5.0 years ago by 43k • written 5.0 years ago by ▴ 30
4
votes
5
replies
2.2k
views
DEseq2 results
heatmaps DEGs PCA
updated 5.0 years ago by ★ 4.0k • written 5.0 years ago by • 0
0
votes
0
replies
1.1k
views
How to generate input file for Bioconductor package heatmaps
heatmaps input file
updated 7.0 years ago by 68k • written 7.0 years ago by ▴ 10
34 results • Page 1 of 1
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Comment: Question on processing compound protein groups in limpa by JKim • 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa by Gordon Smyth 53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input by Gordon Smyth 53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2 by a2a2hset32aa • 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts by a2a2hset32aa • 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
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Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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