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deconrnaseq
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Improving Gene Matching for CIBERSORT Deconvolution with Monaco Reference Matrix in Bulk RNA-Seq
DeconRNASeq
AnnotationDbi
org.Hs.eg.db
20 months ago
chunglee13
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3
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13
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2.2k
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Limma model.matrix design with batch effect and different life stages proportion estimates
DeconRNASeq
limma
updated 20 months ago by
Masongeorge
• 0 • written 20 months ago by
ij283
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Answer: Issue loading and downloading Bioconductor 3.22 packages after update
by
James W. MacDonald
68k
As Robert and ATpoint have mentioned, you need to allow more time to download a large file like this. ``` > options(timeout = 5e5) > l…
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
by
Robert Castelo
★ 3.4k
Hi, the package you refer to is not called `SNPlocs.HSapiens.dbSNP155.GRCh38`, but `SNPlocs.Hsapiens.dbSNP155.GRCh38`, note the lowercase l…
Comment: Issue loading and downloading Bioconductor 3.22 packages after update
by
ATpoint
★ 5.0k
"Breaks" needs a more detailed explanation, together with code and error messages. Can you confirm it's not just the R download timeout aft…
Comment: Reproducibility of code in various Bioconductor versions
by
strawberry3
• 0
Thank you for advice! I have updated Bioconductor to the newest one, but now some of my commands don't work anymore, and I cannot download …
Answer: Reproducibility of code in various Bioconductor versions
by
Gordon Smyth
53k
I'm not familiar with the packages you mention, but the whole reason why Bioconductor has versions is that code and annotation change. Code…
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Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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