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des
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DESeq2 inconsistent fits depending on model design with interacting factors
des
DESeq2
written 3 months ago by
fedor.bezrukov
▴ 10
0
votes
1
reply
613
views
unreal negative log2fc values
DESeq2
des
updated 16 months ago by
James W. MacDonald
68k • written 16 months ago by
Atul K.
• 0
2
votes
9
replies
1.8k
views
Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
DESeq2
RUVSeq
RUVseq
BatchEffect
DES
updated 19 months ago by
James W. MacDonald
68k • written 19 months ago by
Alexandre
• 0
0
votes
1
reply
613
views
Bioinformatics student
Des
DESeq2
updated 19 months ago by
hemantcnaik
• 0 • written 19 months ago by
Sahar
• 0
2
votes
2
replies
772
views
With DESeq2 "Not full rank" Error with design
DESeq2
DEs
20 months ago
feather-W
• 0
0
votes
1
reply
887
views
Design structure
DESeq2
des
updated 3.0 years ago by
Michael Love
43k • written 3.0 years ago by
Devin
• 0
0
votes
1
reply
979
views
Design Matrix Singularity Error
DES
DESIGN
updated 3.2 years ago by
Michael Love
43k • written 3.2 years ago by
mike
• 0
0
votes
1
reply
1.1k
views
Matrix not full rank (time-series experiment with one group and covariates )
DESeq2
DES
updated 4.9 years ago by
Michael Love
43k • written 4.9 years ago by
heikki.sarin
▴ 10
8 results • Page
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Comment: Guidance Requested on GCN Network Analysis and Module Enrichment in R
by
insuraasancetaxrealty
• 0
Ensure your SummarizedExperiment object correctly incorporates the RPKM expression matrix, GTF gene annotation [link][1] , and sample metad…
Comment: Length of 'dimnames' [1] not equal to array extent
by
insuraasancetaxrealty
• 0
If you re experiencing unexpected results while running your fitGAM function, it s important to check that your dataset s dimnames are cons…
Comment: athPkgBuilder data source :missing probesets
by
rehmat
• 0
<a href="https://flickleather.com/">leather</a>
Comment: Extract snp information from genomic regions with biomaRt -> "oaries_snp"
by
tomaamylikefood
• 0
Using biomaRt to extract SNP information from genomic regions is as simple as setting the correct dataset in this case, and defining your …
Comment: Save the Date for EuroBioC2026 in Turku!
by
tomaamylikefood
• 0
If you re interested in staying productive and entertained while following updates from events like EuroBioC2026, you can Download free And…
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Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors
Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors
Issues with downloading biomaRt - SeqInfo and S4 Vectors
Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
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