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destiny
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destiny package - broken manual link and no Vignette - why active?
destiny
written 4.2 years ago by
ullrich
▴ 20
0
votes
1
reply
1.3k
views
can't install destiny package
destiny
updated 4.3 years ago by
Basti
▴ 780 • written 4.3 years ago by
chet.seligman
• 0
1
vote
1
reply
5.4k
views
package ‘destiny’ is not available for Bioconductor version '3.13'
destiny
BiocVersion
updated 4.3 years ago by
shepherl
4.2k • written 4.3 years ago by
Yiming
▴ 10
0
votes
1
reply
1.6k
views
dm_predict function Error in predict_censoring_impl(data, data2, censor_val, censor_range, : expecting a single value
destiny
8.2 years ago
dongji5211314
• 0
0
votes
0
replies
1.2k
views
Error in pr_DB$get_entry(method) : could not find function "f"
destiny
software error
bug
8.9 years ago
mrodriguezorejuela
• 0
0
votes
1
reply
1.2k
views
algorithm of pm.predict method
destiny
updated 9.4 years ago by
philipp.angerer
• 0 • written 9.9 years ago by
yang.chen
• 0
6 results • Page
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Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Did you use the development version as Aaron suggested? There is an argument to read the market matrix file directly into an `SVT_SparseMat…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
dan.gatti
• 0
Was anyone else able to put the pieces together using the reply above? I read in one 10X sample using DropletUtils::read10xCounts() and thi…
Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G
by
dzv20413
• 0
Wow, GBCC 2025 sounds amazing, can not wait to see the logo contest results! Also, I just played [Level Devil][1] and it is super addictive…
Comment: Memory error while running alignments
by
Erik Wright
▴ 150
How much memory is available on the computer? A distance matrix of 50k sequences requires at least 50k*50k/2 * 8 bytes = 10GB, assuming the…
Comment: NA values for DESeq2 p-values and adjusted p-values using large sample sizes
by
Gabriel
• 0
Thank you very much for the reply. However, none of these three options seems to fit: 1) The genes for which NA appears do not have all 0 …
Votes
Comment: Check removeBatchEffect effectiveness
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?
Answer: DESeq2 design for haplotype MPRA
A: Different logFC (log2foldchange) values for genes from limma-voom and other too
Comment: Check removeBatchEffect effectiveness
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