0
votes
0
replies
719
views
0
votes
0
replies
884
views
0
votes
1
reply
1.9k
views
1
vote
1
reply
1.5k
views
updated 8.2 years ago by
Michael Lawrence
★
11k
•
written 8.2 years ago by
hauken_heyken
▴
80
Recent ...
Replies
Answer: When to use edgeR or limma
by
James W. MacDonald
68k
I would use edgeR's quasi-likelihood model for any analysis with a smaller number of observations (like 3 vs 3 or similar), but if you have…
Answer: limpa-blank normalization and Spectronaut's PTM stoichiometry
by
Gordon Smyth
53k
The short answer is that limpa reads standard feature-level intensities from Spectronaut or other quantifications tools. limpa is designed …
Comment: Question about the filterByExpr function inputs in edgeR
by
mohammedtoufiq91
▴
10
@gordonsmyth Noted, thank you very much.
Comment: Question about the filterByExpr function inputs in edgeR
by
Gordon Smyth
53k
Regarding edgeR v4 filtering, I didn't mention anything about a minimum count of 10 but rather said "a positive count". So a minimalistic f…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry
by
JKim
•
0
Hi Emily,
He left some comments regarding normalization. Here is the relevant quote:
> The EList object produced by dpcQuant(), containi…
Votes
Awards
• All
Popular Question to
Stephanie M. Gogarten
▴
890
Autobiographer to
Frances Turner
▴
20
Popular Question to
maltethodberg
▴
180
Popular Question to
mohammedtoufiq91
▴
10
Popular Question to
Lluís Revilla Sancho
▴
760
Locations
• All
Japan, 34 minutes ago
Melbourne, Australia, 36 minutes ago
The city by the bay, 1 hour ago
United States, 1 hour ago
WEHI, Melbourne, Australia, 2 hours ago
Japan, 34 minutes ago
Melbourne, Australia, 36 minutes ago
The city by the bay, 1 hour ago
United States, 1 hour ago
WEHI, Melbourne, Australia, 2 hours ago
Traffic: 949 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6