Biostar Exome

Showing : exome • reset

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408

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edgeR exome

updated 3.2 years ago by Aaron Lun ★ 27k • written 3.2 years ago by am3 • 0

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715

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whole exome sequence R bioconductor exome

5.4 years ago • updated 5.3 years ago bioinf ▴ 10

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995

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rsamtools whole exome sequence bam exome R

5.4 years ago bioinf ▴ 10

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715

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exome dnaseq WES

6.1 years ago arvand.akbari • 0

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909

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cnv exome

6.3 years ago Bio152 ▴ 150

5 results • Page 1 of 1

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Comment: How to get DESeq2 results for a list of genes by ATpoint ★ 1.3k

That's a problem related to your lack of R basics, neither DESeq2 or Bioconductor software/technical problem. Please learn R basics first. …

Comment: How to get DESeq2 results for a list of genes by Lucía ▴ 10

Hi, thank you! Unfortunately that doesn't work. The first option gives me this error: ``` # Extracting for list my_genes <- read.delim("di…

Comment: Error by ATpoint ★ 1.3k

https://github.com/conda-forge/rpy2-feedstock/issues/1

Comment: Error: BiocParallel errors by lxl13260684135 • 0

I came across the same problem, have you solved it?

Answer: How to get DESeq2 results for a list of genes by ATpoint ★ 1.3k

Standard rules apply for filtering in R. If the genes are the rownames of the results object `res` then: res[my_ges,] or if the colu…

Votes

C: DESEQ2 'results' filter by value for multiple conditions (contrast off?)

How to get DESeq2 results for a list of genes

Answer: setting sizeFactors from scran :: caculateSumFactors.

Answer: ComplexHeatmap: Change font size of annotation axis values

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