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frma
•
reset
0
votes
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replies
2.8k
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Seperate quantile normalization but common probe summary by median polish (oligo package)?
Normalization
probe
oligo
frma
frmaTools
Normalization
probe
oligo
frma
frmaTools
13.3 years ago
Schott, Johanna
▴ 20
0
votes
1
reply
1.4k
views
Seperate quantile normalization but common probe summary by median polish (oligo package)?
Normalization
probe
frma
frmaTools
Normalization
probe
frma
frmaTools
updated 13.3 years ago by
James W. MacDonald
68k • written 13.3 years ago by
Guest User
★ 13k
0
votes
4
replies
1.9k
views
errors in FRMA
Annotation
hgu133a2
hgu133a
frma
Annotation
hgu133a2
hgu133a
frma
updated 13.6 years ago by
Matthew McCall
▴ 830 • written 13.6 years ago by
Mayte Suarez-Farinas
▴ 510
0
votes
1
reply
1.6k
views
FrozenRMA how to
Microarray
Network
hgu133plus2
Biobase
PROcess
KEGGSOAP
beadarray
EBImage
edgeR
frma
updated 13.8 years ago by
Matthew McCall
▴ 830 • written 13.8 years ago by
Alex Sanchez
▴ 20
0
votes
1
reply
1.1k
views
problem with frma on U133AAofAv2 platform
probe
frma
probe
frma
updated 14.1 years ago by
Matthew McCall
▴ 830 • written 14.1 years ago by
Wang,Ying
▴ 20
0
votes
1
reply
1.3k
views
problem with frma( )
convert
frma
convert
frma
updated 14.2 years ago by
Matthew McCall
▴ 830 • written 14.2 years ago by
Wang,Ying
▴ 20
0
votes
4
replies
1.5k
views
[XPS] integrating data processed outside of XPS into the tree
PROcess
xps
frma
PROcess
xps
frma
updated 14.2 years ago by
cstrato
★ 3.9k • written 14.2 years ago by
thomas sierocinski
▴ 50
0
votes
2
replies
1.4k
views
fRMA error when using exprs()
Normalization
frma
Normalization
frma
14.2 years ago
SylvainBrohée
▴ 50
0
votes
3
replies
1.3k
views
frma vectors for mouse 430 2.0
frma
frma
updated 14.5 years ago by
Matthew McCall
▴ 830 • written 14.5 years ago by
Ariel Chernomoretz
▴ 170
0
votes
3
replies
1.8k
views
GCRMA: feature request
GO
Regression
probe
gcrma
frma
GO
Regression
probe
gcrma
frma
updated 14.9 years ago by
Björn Usadel
▴ 250 • written 14.9 years ago by
Guido Hooiveld
★ 4.1k
60 results • Page
2 of 2
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Replies
Answer: problem reading bam files into nucleR
by
James W. MacDonald
68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Answer: Question about DESeq2 Design for Paired Treatment Study
by
ATpoint
★ 5.0k
It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …
Comment: problem reading bam files into nucleR
by
efoss
▴ 10
I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…
Answer: two questions about limma
by
Gordon Smyth
53k
Answered here: https://support.bioconductor.org/p/16318/
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
by
Ahmed Salah
• 0
Thank you very much! will take that into consideration
Votes
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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