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Genominator error when calling syste.time
Genominator DESeq Genominator DESeq
updated 13.6 years ago by ★ 6.5k • written 13.6 years ago by ▴ 200
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Fwd: Genominator problem
Genominator Genominator
15.2 years ago Johnny H ▴ 80
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Genominator problem
Genominator Genominator
updated 15.2 years ago by ★ 6.5k • written 15.2 years ago by ▴ 80
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Genominator question
Genominator Genominator
15.4 years ago Kasper Daniel Hansen ★ 6.5k
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Saving/loading Genominator ExpData-class object
GO Genominator GO Genominator
updated 15.4 years ago by ★ 6.5k • written 15.4 years ago by ▴ 500
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Genominator question
Genominator Genominator
15.5 years ago raffaele calogero ▴ 500
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Genominator upgraded in the release branch
PROcess Genominator PROcess Genominator
15.8 years ago Kasper Daniel Hansen ★ 6.5k
7 results • Page 1 of 1
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Comment: deseq2 filter the low counts by Michael Love 43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
Comment: deseq2 filter the low counts by empty_mt • 0
Hi Michael, My matrix consists of 36 samples from 6 treatments (6 samples/ treatment), whether I adjust prefiltering parameters or not, in…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0
That works. I didn't realize what you said about HDF5 files. We always keep those and archive the MTX files. I'm able to read in the file…
Comment: DESeq2 interactions by Michael Love 43k
GPT even v4 gives pretty good answers to DESeq2 questions that are similar to those already posted on the support site. I've also noticed …
Answer: Important: Bioconductor Release 3.22 Delayed by shepherl 4.2k
We will continue with the release on Thursday October 30th. We have shifted one day as originally planned. Thank you
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Answer: DESeq2 interactions
Answer: Important: Bioconductor Release 3.22 Delayed
A: Multi-level experiments in Limma
Answer: Should voomWithQualityWeights still be used when the sample-specific weights var
Answer: DESeq2 for candidate gene analysis
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