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Comment: parameters of filterByExpr
by
Gordon Smyth
52k
`k = 18+(19-18)*0.7` is 18.7, not 12.6. And it is not rounded down.
The operation of the function on your data is simple and unambiguous. …
Answer: Missing bioconductor documentation for methylationArrayAnalysis package
by
James W. MacDonald
68k
It's [not building][1]. You could email the maintainer ([see here][2]) and ask when it's going to be fixed.
[1]: https://bioconducto…
Answer: How to load scRNA-seq data from GEO
by
James W. MacDonald
68k
There are three things you need; the barcodes, the market matrix file, and the row data. I downloaded the first set of barcodes and the ass…
Answer: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene
by
nakotiw191
•
0
[Printed keyrings][1] Bioconductor version 3.20 (BiocManager 1.30.25), R 4.4.3 (2025-02-28 ucrt) Installing package(s) 'TxDb.Mmusculus.UCSC…
Answer: compute_fasta_digest does not match Salmon index hash
by
nakotiw191
•
0
[Custom sticky notes][1] keep your brand organized and accessible, even when technical hiccups like "compute\_fasta\_digest does not match …
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