Bioconductor Gpls

Showing : gpls • reset

votes

2.4k

views

Annotation gpls GEOquery GEOmetadb Annotation gpls GEOquery GEOmetadb

updated 11.3 years ago by Sean Davis 21k • written 11.3 years ago by rohan bareja ▴ 200

votes

replies

1.9k

views

Annotation gpls GEOquery GEOmetadb Annotation gpls GEOquery GEOmetadb

11.3 years ago rohan bareja ▴ 200

votes

1.6k

views

hexbin gpls RBGL impute Icens hopach maanova RLMM CORREP cycle hexbin gpls RBGL Icens

updated 13.4 years ago by Nicholas Lewin-Koh ▴ 430 • written 13.4 years ago by Kurt Hornik ▴ 10

votes

replies

1.2k

views

gpls gpls

14.0 years ago Carlos J. Gil Bellosta ▴ 40

votes

replies

1.0k

views

gpls gpls

14.0 years ago Carlos J. Gil Bellosta ▴ 40

votes

replies

2.4k

views

Sequencing Microarray Genetics Annotation gpls convert GEOquery GEOmetadb Sequencing gpls

updated 14.6 years ago by Alex Levitchi ▴ 30 • written 14.6 years ago by Sean Davis 21k

votes

replies

1.9k

views

aCGH gpls aCGH GEOquery cycle aCGH gpls aCGH GEOquery cycle

15.1 years ago Sean Davis 21k

votes

replies

1.6k

views

gpls GEOquery gpls GEOquery

18.1 years ago claudio.is@libero.it ▴ 210

votes

1.7k

views

Proteomics Annotation Normalization GO Cancer CGH pamr gcrma gpls affyPLM webbioc bim

updated 20.9 years ago by Wolfgang Huber ★ 13k • written 20.9 years ago by A.J. Rossini ▴ 810

9 results • Page 1 of 1

Recent ...

Replies

Comment: DiffBind custom normalization factor by Abbie • 0

Hello! Thanks so much for adding dba.normalize and all the documentation in the manual! I'm hoping I can ask a follow-up question here. I…

Answer: CpGs with genomic positions greater than the chromosome size in EPICv2? by James W. MacDonald 68k

All of the annotation packages provided by Bioconductor are simply repackaging of existing data from one or more sources. In this case, the…

Comment: Using TPM from tximport of Salmon output for singscore by Kent • 0

Thank you for the suggestions Michael. Would you say that after filtering out the low count genes, `rlog(counts, blind = T)` is doing the s…

Comment: Using TPM from tximport of Salmon output for singscore by Michael Love 43k

For clustering generally we recommend `vst()` see the workflow for example. For working with individual samples, I can see how a scaling/t…

Comment: DESeq2 model - How to test case/control time course model when taking account wi by Michael Love 43k

I'd recommend working with a local statistician or someone familiar with linear models in R. I have to reserve my time on the support site …

Votes

clusterProfiler-GO enrichment Error

A: Machine learning in R book

Data preparation and Machine learning on time course RNAseq data

Answer: Use of org.Rn.eg.db with GRCr8 reference genome

Awards • All

Popular Question to Dario Strbenac ★ 1.6k