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Comment: orgDB
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shepherl
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You should look at the documentation on the help pages for those packages. It should be clear enough there. But to speed things along:
`…
Comment: DiffBind edgeR normalization --- why are the normalization factors all equal to
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Harry
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It's interesting to see how the normalization factors are all 1, yet the MA plot reflects changes, indicating that the normalization proces…
Comment: European Bioconductor Conference 2023 planning
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Andrew
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Great information! This is a great opportunity for the computational biology community to connect and grow. @[Chill Guy Clicker][1]
[1…
Answer: Is it possible to model DNA methylation as a dose response in edgeR?
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Gordon Smyth
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edgeR works with any linear model, so handles any combination of factors and covariates. If you include dose as a covariate in the linear m…
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