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rbiopaxparser
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bug in nem's transitive.reduction? (and thus rBiopaxParser)
nem
graphs
rbiopaxparser
7.7 years ago
Ramon Diaz-Uriarte
▴ 70
0
votes
1
reply
1.2k
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Rbiopaxparser: how to extract a subnetwork from a pathway
Rbiopaxparser
updated 10.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 10.0 years ago by
Guido Leoni
▴ 200
0
votes
2
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1.4k
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rBiopaxParser error
rBiopaxParser
rBiopaxParser
updated 11.4 years ago by
Dan Tenenbaum
★ 8.2k • written 11.4 years ago by
suzy.stiegelmeyer@syngenta.com
▴ 40
0
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4
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1.5k
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rBiopaxParser, Reactome and namespaces
rBiopaxParser
rBiopaxParser
updated 11.4 years ago by
Frank Kramer
▴ 60 • written 11.4 years ago by
Paul Shannon
▴ 470
0
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0
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1.2k
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BioPAX parsing
Pathways
Network
Rgraphviz
rBiopaxParser
Pathways
Network
Rgraphviz
rBiopaxParser
12.1 years ago
Frank Kramer
▴ 10
5 results • Page
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Answer: Biostrings: Error writing long reads (>200kbps) with writeQualityScaledXStringSe
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Aidan
▴ 40
As far as I am aware, the restriction is historical..having a fixed buffer size in the internal C methods makes the algorithms a little sim…
Comment: Diffenrent result from EMBOSS needle and Biostrings pairwiseAlignment ?
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rohitsatyam102
▴ 20
I am facing a similar issue.
Answer: How to subset voomLmFit (MArrayLM) object?
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Gordon Smyth
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Yes, the current behaviour is absolutely intentional. It doesn't seem to me to be meaningful or useful to try to subset the EList object au…
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James W. MacDonald
67k
Heatmaps don't do any comparisons. They just plot the underlying data in a matrix and color the blocks based (in your case) on the by-gene …
Comment: Are transformed values from rlog /vst log2 normalized counts?
by
Eva
▴ 10
I understood exactly what you said, but I got confused with the documentation and the info that gives about rlog because it seems to be tha…
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A: eBayes warning: zero sample variances
A: eBayes warning: zero sample variances
Answer: Are transformed values from rlog /vst log2 normalized counts?
Answer: Are transformed values from rlog /vst log2 normalized counts?
Comment: Are transformed values from rlog /vst log2 normalized counts?
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