Bioconductor Gsealm

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Network limma GOstats GSEAlm edgeR ReportingTools Network limma GOstats GSEAlm edgeR

13.0 years ago Malcolm Cook ★ 1.6k

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Network limma GOstats GSEAlm edgeR ReportingTools Network limma GOstats GSEAlm edgeR

updated 13.0 years ago by Malcolm Cook ★ 1.6k • written 13.0 years ago by Josh Kaminker ▴ 20

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biomaRt GSEAlm biomaRt GSEAlm

updated 13.5 years ago by James W. MacDonald 68k • written 13.5 years ago by b1gorsuch@comcast.net ▴ 20

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GSEAlm GSEAlm

17.0 years ago Mark W Kimpel ▴ 830

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GO GSEAlm GO GSEAlm

updated 17.1 years ago by rgentleman ★ 5.5k • written 17.1 years ago by Mark W Kimpel ▴ 830

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GO affy goTools Category GSEABase GSEAlm GO affy goTools Category GSEABase GSEAlm

updated 17.2 years ago by Dykema, Karl ▴ 90 • written 17.2 years ago by Mark W Kimpel ▴ 830

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GSEAlm GSEAlm

17.6 years ago Assaf Oron ▴ 40

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Comment: How to do differential expresion across time serise with edgeR? by Gordon Smyth 53k

If you have fake replicates, then I think my code answers your question about how to run the edgeR time-course analysis. Regarding tutoria…

Comment: How to do differential expresion across time serise with edgeR? by petergrahamclark ▴ 10

The use case is kinetic model parameterisation. I'm actually a systems biologist not a bioinformatician. (which is why I'm struggling here)…

Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaasocissalpc • 0

Just like attending workshops helps you improve skills in a field, playing 8 Ball Pool helps sharpen your strategy and precision. You can d…

Comment: Upcoming Ensembl API and data access changes - new blog post available by TikTsokaasocissalpc • 0

Thanks for sharing this update. Clear migration timelines and documentation are essential for learners and researchers alike. In healthcare…

Comment: ATACseq rudimentary questions by 4747 • 0

Thank you so much for being detailed, all makes sense now

Votes

Answer: How to install packages such as TCGAbiolinks, SumarizedExperiment?

A: limma-voom duplicateCorrelation once or twice, difference?

A: limma: comparison of repeat measurements - blocking or within-subject correlatio

Answer: DecideTest vs topTAGs in edgeR

A: LIMMA time series spline model.matrix design setup

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Popular Question to Lluís Revilla Sancho ▴ 760