Biostar Harshlight

Showing : harshlight • reset

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affyPLM Harshlight affyPLM Harshlight

updated 9.2 years ago by Wolfgang Huber 13k • written 9.2 years ago by Guest User ★ 12k

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Microarray Normalization hu6800 affy gcrma marray nnNorm Harshlight Microarray hu6800

9.3 years ago Scott Robinson ▴ 130

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affy Harshlight affy Harshlight

updated 11.2 years ago by Wolfgang Huber 13k • written 11.2 years ago by Matthew McCormack ▴ 180

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599

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Harshlight Harshlight

12.0 years ago vasantika s ▴ 30

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617

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Harshlight Harshlight

13.3 years ago David Garfield ▴ 30

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cdf affxparser Harshlight cdf affxparser Harshlight

updated 14.6 years ago by James W. MacDonald 62k • written 14.6 years ago by Guido Hooiveld ★ 3.5k

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Answer: nullranges by Michael Love 39k

Thanks for posting here. So you want to move the small RNA loci around the genome? Do they tend to cluster? For mouse or human genom…

Answer: Question about GWASTools gdsSubset by SuperD • 0

Have to define 'snp,scan' or 'scan,snp' for my case.

Comment: Not able to download recount3 data by Leonardo Collado Torres ★ 1.0k

Please don't reopen that issue thread, as it will ping lots of people. Can you try using the newly documented Amazon AWS mirror? ```R lib…

Comment: mas5calls function doesn't work; mirna40cdf problem by Berna • 0

Thanks for all answers. I have tried, but still get an error message. Do you know how I can work around this? > library(pd.mir…

Answer: struggling to create a heatmap by ATpoint ★ 2.1k

I am reluctant to read through that wall of code. Here is what would work. Note that prefiltering makes sense before, not after running `DE…

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Significant reporter activity with mpralm function

Answer: I cannot install annotables package in Rstudio (macOS)

Answer: log2 of normalized counts for further analyzes

Answer: Clarification of what DESeq2::estimateSizeFactors controlGenes does and when it

Clarification of what DESeq2::estimateSizeFactors controlGenes does and when it should *not* be used

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Commentator to Lucia ▴ 40