Bioconductor Lpsymphony

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lpsymphony

updated 17 months ago by Mike Smith ★ 6.5k • written 6.2 years ago by mark.russo ▴ 40

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lpsymphony

updated 7.2 years ago by rreck ▴ 20 • written 7.2 years ago by Haiying.Kong ▴ 110

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lpsymphony

7.2 years ago Michael Love 42k

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IHW lpsymphony

updated 6.6 years ago by vladislav.kim ▴ 10 • written 6.6 years ago by Charlotte Soneson ▴ 170

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lpsymphony package installation bioclite

updated 6.4 years ago by vladislav.kim ▴ 10 • written 6.5 years ago by sunnetau • 0

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R lpsymphony mac os x

updated 5.4 years ago by Wolfgang Huber ★ 13k • written 5.4 years ago by tohsumi • 0

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lpsymphony R parameters control warm start

updated 7.9 years ago by Wolfgang Huber ★ 13k • written 7.9 years ago by chiel • 0

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792

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lpsymphony IHW

updated 4.5 years ago by Mike Smith ★ 6.5k • written 4.5 years ago by mattjdowle • 0

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743

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lpsymphony

5.3 years ago tohsumi • 0

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lpsymphony

2.2 years ago starsareintherose • 0

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lpsymphony Maaslin2

18 months ago Vic • 0

11 results • Page 1 of 1

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Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu by James W. MacDonald 65k

I doubt you have that many contrasts. I think that is probably the number of rows. What does `dim(fit)` return (and `head(fit$coef)`)?

Answer: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you fit a cell means model (without an intercept), you will have to construct contrasts using `makeContrasts` and fit them using `contra…

Comment: Memory errors using read.bismark? by Juan Higareda • 0

Thanks a lot Peter, We solved the problem, IT had implemented a policy of RAM usage that started a conflict with any RAM-hungry process, m…

Answer: meffil.snp.concordance by James W. MacDonald 65k

This support site is meant to help people with technical questions about Bioconductor packages. The `meffil` package is not Bioconductor, n…

Answer: minfi latest update for EPIC V2 chip by James W. MacDonald 65k

Zuguang Gu submitted both of those packages as part of the current release, and I submitted a PR for `minfi` so it will now distinguish the…

Votes

Answer: How to save the DEXSeq results

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Comment: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

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