updated 7.5 years ago by
Lukas Chavez
▴
570
•
written 7.5 years ago by
anupriyaverma1408
•
0
1
vote
1
reply
1.4k
views
Recent ...
Replies
Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
by
Paul
•
0
This is the traceback I got after running AddMotifs if this is informative?
```
23: stop(wmsg("trying to load regions beyond the boundaries…
Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
by
James W. MacDonald
67k
You will probably have to ask the Signac people. I don't know exactly what is going on under the hood for `AddMotif`, but the `EnsDb` seems…
Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
by
Paul
•
0
Unfortunately I've updated my code with the newest GRCm39 genome, and yet I am still getting the same error.... Is there anything else I ca…
Comment: WGCNA with TPM tables
by
ATpoint
★
4.5k
WGCNA is not a Bioconductor package, but generally:
If you want to do serious analysis then find the raw data. There is no guarantee what …
Answer: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
by
James W. MacDonald
67k
The `EnsDb.Mmusculus.v79` package is mm38, not mm39. If you want a current `EnsDb`, use `AnnotationHub`
```
> library(AnnotationHub)
>…
Votes
Awards
• All
Popular Question to
Anna
▴
20
Popular Question to
Talip
▴
10
Popular Question to
alexandre.blais
▴
50
Locations
• All
United States, just now
United States, just now
Nigeria, 13 minutes ago
France, 18 minutes ago
United States, 44 minutes ago
United States, just now
United States, just now
Nigeria, 13 minutes ago
France, 18 minutes ago
United States, 44 minutes ago
Traffic: 797 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6