Bioconductor Manor

Showing : manor • reset

0

votes

3

replies

1.9k

views

Cancer Organism MANOR oligo CGHcall BAC Cancer Organism MANOR oligo CGHcall BAC

updated 17.3 years ago by Henrik Bengtsson ★ 2.4k • written 17.3 years ago by Daniel Rico ▴ 110

0

votes

1

reply

1.2k

views

MANOR MANOR

updated 17.9 years ago by Seth Falcon ★ 7.4k • written 17.9 years ago by James Morris ▴ 40

2 results • Page 1 of 1

Recent ...

Replies

Answer: DESeq2 Apeglm Coefficient Reordering / Log2FoldChange Comparison Change by James W. MacDonald 68k

Yes, you can simply flip the sign of the logFC to reverse the direction of the comparison.

Comment: Heatmap of a transformed deseq object with pheatmap by James W. MacDonald 68k

The argument for annotation_col is meant to be a `data.frame`, not a vector. The hint in the error is that it has the wrong number of dimen…

Comment: Heatmap of a transformed deseq object with pheatmap by caroline.zanchi • 0

I used this argument in the second paragraph of code forthe heatmap, this is wehre I got the message Error in `[.default`(annotation_col, c…

Answer: Heatmap of a transformed deseq object with pheatmap by James W. MacDonald 68k

Ah, yes. The non-ASCII character error. My favorite! Please note that `pheatmap` is not a Bioconductor package, so you should be asking …

Comment: Heatmap of a transformed deseq object with pheatmap by caroline.zanchi • 0

It is in ! It just took longer than planned :) ... aaaand now that I added the heatmap in I realize lits of genes really do not look like t…

Votes

Comment: How to load scRNA-seq data from GEO

limma correction for tumor purity

Awards • All