Bioconductor Medips

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1.2k

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BSgenome BSgenome genomes MEDIPS BSgenome BSgenome genomes MEDIPS

updated 13.1 years ago by Kasper Daniel Hansen ★ 6.5k • written 13.1 years ago by Guest User ★ 13k

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1.6k

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Sequencing MEDIPS Sequencing MEDIPS

updated 13.8 years ago by Oscar Rueda ▴ 40 • written 13.8 years ago by Guest User ★ 13k

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886

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genomes MEDIPS genomes MEDIPS

updated 13.8 years ago by Valerie Obenchain ★ 6.8k • written 13.8 years ago by Vining, Kelly ▴ 220

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984

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MEDIPS MEDIPS

updated 14.0 years ago by Joern Dietrich ▴ 10 • written 14.0 years ago by Elisabetta Manduchi ▴ 160

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1.1k

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BSgenome BSgenome MEDIPS BSgenome BSgenome MEDIPS

15.0 years ago Nora ▴ 20

105 results • Page 3 of 3

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Comment: Help with defining groups by Phinney, Brett ▴ 10

I got it working , thank you!!!

Comment: Check removeBatchEffect effectiveness by massimo • 0

I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…

Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0

Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

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Comment: Check removeBatchEffect effectiveness

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