Bioconductor Metabolite Data

Showing : metabolite Data • reset

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metabolite data xcms2

updated 8 months ago by Elodie • 0 • written 8.2 years ago by Yashwant ▴ 10

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metabolite data

updated 6.6 years ago by shepherl 4.1k • written 6.6 years ago by knishida ▴ 20

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limma metabolite data moderated t-test

updated 7.7 years ago by Aaron Lun ★ 28k • written 7.7 years ago by iglezer • 0

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metaboliteData pcaMethods pcamethods r package metabolite Data

updated 8.3 years ago by Valerie Obenchain ★ 6.8k • written 8.3 years ago by lukasz.galecki ▴ 10

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Comment: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran by Arctic • 0

Many thanks for the link to the C++ code. I will see if I can find someone with C++ experience to help me with the code breakdown from her…

Answer: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran by Aaron Lun ★ 28k

It's calling C++ code, see the relevant function definitions on [GitHub](https://github.com/knncolle/BiocNeighbors/blob/master/src/generics…

Answer: DESeq2 by ATpoint ★ 4.8k

Time courses are often inevitable batches but you should have done the library prep at the same day, just extract RNA per day. If not then …

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer. This was very useful, I will optimize my functions so they can handle SE objects.

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer, very useful!

Votes

Answer: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran

Is it possible to speed up VariantAnnotation's rowRanges function when converting to a dataframe?

Answer: Is it possible to speed up VariantAnnotation's rowRanges function when convertin

Comment: ComBat with repeated measures

Answer: Package developing and interoperation with Bioconductor

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