0
votes
1
reply
715
views
0
votes
0
replies
11
views
15 months ago
Steven
0
0
votes
3
replies
930
views
0
votes
1
reply
735
views
News:
Stop mirror service
1
vote
2
replies
919
views
17 months ago
Daniel
•
0
0
votes
2
replies
860
views
0
votes
6
replies
1.3k
views
updated 19 months ago by
Gordon Smyth
53k
•
written 19 months ago by
Faisal
•
0
0
votes
1
reply
747
views
written 19 months ago by
Karlison
•
0
0
votes
1
reply
574
views
updated 21 months ago by
James W. MacDonald
68k
•
written 21 months ago by
jianyang.liu
•
0
Recent ...
Replies
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Aaron already answered your question. If you have an HDF5 file, it will be read in as a `TENxMatrix` object, which isn't actually read in -…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
dan.gatti
•
0
Very strange. We have the same package versions.
I tried adding the mtx.class, type, and delayed arguments, but it's still making the coun…
Comment: DESeq2 for candidate gene analysis
by
piffelpaff
▴
20
thank you so much for answering Dr. Love!
Answer: DESeq2 for candidate gene analysis
by
Michael Love
43k
Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Oh.
```
> z <- read10xCounts(c(tmpdir, tmpdir), mtx.class = "SVT_SparseMatrix", delayed = TRUE)
> class(counts(z))
[1] "DelayedMatrix"
att…
Awards
• All
Popular Question to
Matej
•
0
Popular Question to
Gordon Smyth
53k
Popular Question to
Hervé Pagès
16k
Popular Question to
Josef Frank
•
0
Popular Question to
dan.gatti
•
0
Locations
• All
USA, 12 minutes ago
United States, 44 minutes ago
United States, 1 hour ago
WEHI, Melbourne, Australia, 3 hours ago
United States, 6 hours ago
USA, 12 minutes ago
United States, 44 minutes ago
United States, 1 hour ago
WEHI, Melbourne, Australia, 3 hours ago
United States, 6 hours ago
Traffic: 994 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6