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Retrieving Package Metadata from Bioconductor API: Versions and Dependencies
metaMSdata
updated 16 months ago by
shepherl
4.2k • written 16 months ago by
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Spam:
How do professional SEO services enhance user experience on my website?
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How to search Pubmed Central or other fulltext literature base using regex?
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Stop mirror service
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Can log2cpm be used for proteomics data normalization?
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18 months ago
Daniel
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featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_get_next_read_BIN: Assertion `l_name < 256' failed. Aborted (core dumpe…
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19 months ago
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Doing comparison of RNA-seq data using EdgeR
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edgeR
updated 20 months ago by
Gordon Smyth
53k • written 20 months ago by
Faisal
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Visium RNA
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written 20 months ago by
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How to control RAN-seq samples from different libraries
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updated 21 months ago by
James W. MacDonald
68k • written 22 months ago by
jianyang.liu
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Comment: Bioconductor 3.22 Release Schedule
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This release reminds me of the strategies in [solitaired](https://solitaired.io) to overcome live solitaires.
Answer: Create consensusMatrix for codon bases
by
Kevin Blighe
★ 4.0k
To address your query on generating a codon frequency matrix analogous to the output from `consensusMatrix` for a `DNAStringSet` object, no…
Answer: Finding duplicated entries in GRangesList
by
Kevin Blighe
★ 4.0k
The duplicated and unique functions operate element-wise on GRangesList objects. This means that they apply the respective function to each…
Answer: sigDF object in sesame
by
Kevin Blighe
★ 4.0k
Your interpretation of the column headers in the SigDF object is correct: MG corresponds to the methylated signal intensity in the green ch…
Answer: DESeq2 on non-RNASeq counts data
by
Kevin Blighe
★ 4.0k
The use of DESeq2 for count data from artificial sequences is acceptable, as the program models counts via a negative binomial distribution…
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Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
Answer: Identifying differentially expressed genes in individual samples from a large co
Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction
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