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Retrieving Package Metadata from Bioconductor API: Versions and Dependencies
metaMSdata
updated 18 months ago by 4.3k • written 18 months ago by • 0
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Spam: How do professional SEO services enhance user experience on my website?
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19 months ago Steven 0
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How to search Pubmed Central or other fulltext literature base using regex?
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19 months ago Abiologist • 0
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News: Stop mirror service
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updated 20 months ago by 4.3k • written 20 months ago by • 0
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Can log2cpm be used for proteomics data normalization?
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21 months ago Daniel • 0
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featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_get_next_read_BIN: Assertion `l_name < 256' failed. Aborted (core dumpe…
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21 months ago shuwangxinze1996 • 0
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Doing comparison of RNA-seq data using EdgeR
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updated 22 months ago by 53k • written 22 months ago by • 0
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Visium RNA
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written 22 months ago by • 0
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How to control RAN-seq samples from different libraries
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updated 2.0 years ago by 68k • written 2.0 years ago by • 0
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Comment: soGGi error by shepherl 4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Comment: using limma trend workflow in CAMERA by A.Barden ▴ 20
Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?
Comment: Upcoming Ensembl API and data access changes - new blog post available by Tikaaa2sahaaaq2c • 0
Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…
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Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
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