updated 9.8 years ago by
Gordon Smyth
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written 9.8 years ago by
darshinimamindla
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Comment: Joining different datasets and analyzing using the group-specific condition effe
by
James W. MacDonald
68k
Yes, making a group factor simplifies things, and you will need a new column for disease subject to avoid having a design that is not full …
Comment: Question about the filterByExpr function inputs in edgeR
by
mohammedtoufiq91
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10
@gordonsmyth Yes, Gender is more a nuisance factor in our experiment, and our primary interest is to compare groups. I will just use filter…
Comment: Joining different datasets and analyzing using the group-specific condition effe
by
jason.chai
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0
Thank you very much. I had read that and wondered if I used the recommendation in DESeq vignette, I would lose the pairing between groups? …
Comment: Questions about bacon QC and correction on EWAS results
by
sup0903
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0
This is qq plot and histogram generated before bacon correction
![enter image description here][1]
![enter image description here][2]
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Comment: Ensembl site unresponsive via biomaRt
by
sebastianenewell
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0
> I think this is an unrelated issue. The original post includes the
> message Error: 'curl_parse_url' is not an exported object from
> 'na…
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